RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 OR1N2Q8NGR9 330 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 ANAPC16Q96DE5 110 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR2J2O76002 312 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 CD40P25942 277 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 IGFBP7Q16270 282 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 MIDNQ504T8 468 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 LAIR1Q6GTX8 287 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 TMEM65Q6PI78 240 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 MRPS16Q9Y3D3 137 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 A3GALT2U3KPV4 340 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 TMEM265A0A087WTH1 108 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 ANKRD61A6NGH8 418 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 MAT1AQ00266 395 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 TAAR2Q9P1P5 351 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 A0A1B0GUH1 482 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR52A4PA6NMU1 304 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 KIR2DL1P43626 348 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 KIR2DL2P43627 348 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 CCL11P51671 97 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 KLRB1Q12918 225 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 SMN1Q16637 294 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 CDKN3Q16667 212 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 ZNF260Q3ZCT1 412 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 GPR137Q96N19 417 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 SEBOXQ9HB31 216 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 SLC45A2Q9UMX9 530 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 LMO7Q8WWI1 1683 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 RNASE1P07998 156 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 RACK1P63244 317 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 VMA21Q3ZAQ7 101 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 TMEM251Q8N6I4 163 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 C5orf17Q8NAS9 161 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 NXPE3Q969Y0 559 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 CHST8Q9H2A9 424 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 KCND3Q9UK17 655 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 CD70P32970 193 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 MED25Q71SY5 747 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 ZDHHC23Q8IYP9 409 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 AGBL5Q8NDL9 886 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 RAB24Q969Q5 203 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 ONECUT1Q9UBC0 465 aa12.63□□□□□ -0.39
CSPG4P12-202ENST00000559989 BCL9O00512 1426 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 NID2Q14112 1375 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 HSPB2A8KAH6 182 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 RPL27P61353 136 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR1C1Q15619 314 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 HSPB2Q16082 182 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR2I1PQ8NGU4 316 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 TRGV10A0A0A0MS01 117 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 CD99P14209 185 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 MDGA1Q8NFP4 955 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 TMEM255BQ8WV15 326 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 HGDQ93099 445 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 M0R1B8 84 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 SEMA3BQ13214 749 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 RIGQ13278 110 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 NUDT10Q8NFP7 164 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 LRRC15Q8TF66 581 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 NUDT11Q96G61 164 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 C11orf68Q9H3H3 251 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 ZNF552Q9H707 407 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 TIMM10BQ9Y5J6 103 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 UBR1Q8IWV7 1749 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 HRASP01112 189 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 KRASP01116 189 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 MELTFP08582 738 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 SNRPNP63162 240 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 HLA-BQ31612 363 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 LRRC10Q5BKY1 277 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 SLC16A12Q6ZSM3 486 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 GDF7Q7Z4P5 450 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 PELI1Q96FA3 418 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 MARCH5Q9NX47 278 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 EXOGQ9Y2C4 368 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 PCSK6P29122 969 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 PRLHRP49683 370 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 SPNS3Q6ZMD2 512 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 SLC25A43Q8WUT9 341 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 HHIPQ96QV1 700 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 CSF3RQ99062 836 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 ROBO1Q9Y6N7 1651 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 XRCC2O43543 280 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 CYB561P49447 251 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 HNRNPA1L2Q32P51 320 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 CTU1Q7Z7A3 348 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 BATF2Q8N1L9 274 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 SLC7A10Q9NS82 523 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 NUMBLQ9Y6R0 609 aa12.62□□□□□ -0.39
CSPG4P12-202ENST00000559989 TSPAN13O95857 204 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 FGF2P09038 288 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 PTGER1P34995 402 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 SFTPA2Q8IWL1 248 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 SFTPA1Q8IWL2 248 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 SGK494Q96LW2 274 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 PREX1Q8TCU6 1659 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 C5orf49A4QMS7 147 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 POM121BA6NF01 834 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 SLC5A2P31639 672 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 GPR85P60893 370 aa12.61□□□□□ -0.39
CSPG4P12-202ENST00000559989 PLA1AQ53H76 456 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms