RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 KIF17Q9P2E2 1029 aa12.47□□□□□ -0.41
RPL28-208ENST00000559463 IGHV3-64DA0A0J9YX35 117 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 TMEM178BH3BS89 294 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 PLPP2O43688 288 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 SELENOFO60613 162 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 CX3CR1P49238 355 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 CRISP1P54107 249 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 BTG1P62324 171 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 GRB2P62993 217 aaKnown RBP12.46□□□□□ -0.41
RPL28-208ENST00000559463 ZMYND11Q15326 602 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 TAF13Q15543 124 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 MRPL21Q7Z2W9 205 aaKnown RBP12.46□□□□□ -0.41
RPL28-208ENST00000559463 PEG10Q86TG7 708 aaKnown RBP12.46□□□□□ -0.41
RPL28-208ENST00000559463 PARP8Q8N3A8 854 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 OR5K1Q8NHB7 308 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 ZNF420Q8TAQ5 688 aaPredicted RBP12.46□□□□□ -0.41
RPL28-208ENST00000559463 RNF133Q8WVZ7 376 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 DNAJC9Q8WXX5 260 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 DUS3LQ96G46 650 aaKnown RBP12.46□□□□□ -0.41
RPL28-208ENST00000559463 REPIN1Q9BWE0 567 aaKnown RBP12.46□□□□□ -0.41
RPL28-208ENST00000559463 UBAP1Q9NZ09 502 aa12.46□□□□□ -0.41
RPL28-208ENST00000559463 TRAV20A0A0B4J274 112 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 CD300LBA8K4G0 201 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 PHF1O43189 567 aaPredicted RBP12.45□□□□□ -0.42
RPL28-208ENST00000559463 PRODHO43272 600 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 MITFO75030 526 aaPredicted RBP12.45□□□□□ -0.42
RPL28-208ENST00000559463 SBK2P0C263 348 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 PCMT1P22061 227 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 THBS2P35442 1172 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 OPRL1P41146 370 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 SRP9P49458 86 aaKnown RBP12.45□□□□□ -0.42
RPL28-208ENST00000559463 MAB21L1Q13394 359 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 KLHL12Q53G59 568 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 ASRGL1Q7L266 308 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 CXXC5Q7LFL8 322 aaKnown RBP12.45□□□□□ -0.42
RPL28-208ENST00000559463 PRSS45Q7RTY3 260 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 MOGAT3Q86VF5 341 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 SPRYD4Q8WW59 207 aaPredicted RBP12.45□□□□□ -0.42
RPL28-208ENST00000559463 GABARAPL1Q9H0R8 117 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 KLHDC2Q9Y2U9 406 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 AP4S1Q9Y587 144 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 N6AMT1Q9Y5N5 214 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 ANK2Q01484 3957 aa12.45□□□□□ -0.42
RPL28-208ENST00000559463 CCDC182A6NF36 153 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 CYB5R3P00387 301 aaPredicted RBP12.44□□□□□ -0.42
RPL28-208ENST00000559463 ANXA2P07355 339 aaKnown RBP12.44□□□□□ -0.42
RPL28-208ENST00000559463 ANPEPP15144 967 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 PMELP40967 661 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 CD200P41217 278 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 NAA10P41227 235 aaPredicted RBP12.44□□□□□ -0.42
RPL28-208ENST00000559463 GATA4P43694 442 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 SLC15A1P46059 708 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 RAD23AP54725 363 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 PTGES3Q15185 160 aaKnown RBP12.44□□□□□ -0.42
RPL28-208ENST00000559463 TMEM155Q4W5P6 130 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 C1orf229Q6ZS94 237 aaPredicted RBP12.44□□□□□ -0.42
RPL28-208ENST00000559463 SHFQ7M4L6 423 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 AMIGO2Q86SJ2 522 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 LRRC28Q86X40 367 aaPredicted RBP12.44□□□□□ -0.42
RPL28-208ENST00000559463 OR56B2PQ8NGI1 322 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 OTOSQ8NHW6 89 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 LRTOMTQ8WZ04 291 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 DVL3Q92997 716 aaPredicted RBP12.44□□□□□ -0.42
RPL28-208ENST00000559463 SPSB4Q96A44 273 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 PLEKHA8Q96JA3 519 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 TOR3AQ9H497 397 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 TVP23BQ9NYZ1 205 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 DNAJC27Q9NZQ0 273 aa12.44□□□□□ -0.42
RPL28-208ENST00000559463 GGT3PA6NGU5 568 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 F5H0A9 414 aaPredicted RBP12.43□□□□□ -0.42
RPL28-208ENST00000559463 G3V2T6 193 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 IFNL4K9M1U5 179 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 M0R129 80 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 XRCC2O43543 280 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 PNPP00491 289 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 AVPP01185 164 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 CA6P23280 308 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 FASP25445 335 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 ZFP36P26651 326 aaKnown RBP12.43□□□□□ -0.42
RPL28-208ENST00000559463 HSD11B1P28845 292 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 EPHA2P29317 976 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 SRP14P37108 136 aaKnown RBP12.43□□□□□ -0.42
RPL28-208ENST00000559463 MDH2P40926 338 aaKnown RBP12.43□□□□□ -0.42
RPL28-208ENST00000559463 ZNF121P58317 390 aaPredicted RBP12.43□□□□□ -0.42
RPL28-208ENST00000559463 SEC61A1P61619 476 aaKnown RBP12.43□□□□□ -0.42
RPL28-208ENST00000559463 LCN2P80188 198 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 SRSF2Q01130 221 aaKnown RBP12.43□□□□□ -0.42
RPL28-208ENST00000559463 APOFQ13790 326 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 OR8G1Q15617 311 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 SNAPC1Q16533 368 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 ZNF181Q2M3W8 571 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 SLC35D3Q5M8T2 416 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 KDM4DQ6B0I6 523 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 RHOUQ7L0Q8 258 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 SPICQ8N5J4 248 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 CELF2-AS1Q8N7Q2 184 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 ADAT1Q9BUB4 502 aaKnown RBP12.43□□□□□ -0.42
RPL28-208ENST00000559463 TEX12Q9BXU0 123 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 KRT84Q9NSB2 600 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 MRPL15Q9P015 296 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms