RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 ICOSLGO75144 302 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 RABIFP47224 123 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 TM4SF4P48230 202 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 RAET1LQ5VY80 246 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 ABLIM2Q6H8Q1 611 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 BRICD5Q6PL45 260 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 UQCC3Q6UW78 93 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 PPP1R3BQ86XI6 285 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 BATF2Q8N1L9 274 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 GALNT16Q8N428 558 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 GVQW1Q8N7I0 195 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 NECAP1Q8NC96 275 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 C16orf52Q8NHV5 167 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 MEGF10Q96KG7 1140 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 EMC6Q9BV81 110 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 PTGES2Q9H7Z7 377 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 HIF1ANQ9NWT6 349 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 FRRS1LQ9P0K9 344 aa6.43□□□□□ -1.38
USP3-210ENST00000559192 NXT1Q9UKK6 140 aaKnown RBP6.43□□□□□ -1.38
USP3-210ENST00000559192 TRAV34A0A0B4J273 112 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 A0A1W2PPV9 198 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 MED19A0JLT2 244 aaPredicted RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 MLF1P58340 268 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 TAF9Q16594 264 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 AGBL4Q5VU57 503 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 RGS7BPQ6MZT1 257 aaPredicted RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 TMEM217Q8N7C4 229 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 LFNGQ8NES3 379 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 PIGTQ969N2 578 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 SAT2Q96F10 170 aaPredicted RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 CHRNA9Q9UGM1 479 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 MRM2Q9UI43 246 aaKnown RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 OR5K3A6NET4 321 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 RNASEK-C17orf49H0YIS7 233 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 TCF21O43680 179 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 GATCO43716 136 aaKnown RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 ALOX12BO75342 701 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 TRAPPC6AO75865 159 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 HOXD4P09016 255 aaPredicted RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 KITLGP21583 273 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 FCGR2CP31995 323 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 FASLGP48023 281 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 DHPSP49366 369 aaPredicted RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 HNF4GQ14541 408 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 ANKRD16Q6P6B7 361 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 PRR18Q8N4B5 295 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 OR51A4Q8NGJ6 313 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 OR6K3Q8NGY3 331 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 OR10AC1Q8NH08 325 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 HGDQ93099 445 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 BMFQ96LC9 184 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 SLX1AQ9BQ83 275 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 TEX101Q9BY14 249 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 WWTR1Q9GZV5 400 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 ESRP2Q9H6T0 727 aaKnown RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 GDF2Q9UK05 429 aaPredicted RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 SLC17A2O00624 439 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 SEMA7AO75326 666 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 CST2P09228 141 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 RAC2P15153 192 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 DPP4P27487 766 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 THBS3P49746 956 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 ZIC1Q15915 447 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 PRTGQ2VWP7 1150 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 C1orf140Q5VVS0 124 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 ZAR1Q86SH2 424 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 KCNG3Q8TAE7 436 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 FBXO17Q96EF6 278 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 PGLYRP3Q96LB9 341 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 TSPAN32Q96QS1 320 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 TPSD1Q9BZJ3 242 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 C1orf198Q9H425 327 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 SERGEFQ9UGK8 458 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 TRAV8-7A0A075B6U6 113 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 C9orf170A2RU37 121 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 C4orf47A7E2U8 309 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 ZNF354AO60765 605 aaPredicted RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 PPP2CBP62714 309 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 PPP2CAP67775 309 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 SGCBQ16585 318 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 FBXW12Q6X9E4 464 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 GLRX5Q86SX6 157 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 OR5L1Q8NGL2 311 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 NANOS1Q8WY41 292 aaKnown RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 RGP1Q92546 391 aaPredicted RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 CPNE4Q96A23 557 aaPredicted RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 LCORQ96JN0 433 aaPredicted RBP6.42□□□□□ -1.38
USP3-210ENST00000559192 LDAHQ9H6V9 325 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 LHX9Q9NQ69 397 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 MMP26Q9NRE1 261 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 MIOXQ9UGB7 285 aa6.42□□□□□ -1.38
USP3-210ENST00000559192 A0A087WUJ7 227 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 PRSS37A4D1T9 235 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ZNF724A8MTY0 619 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 TMEM229AB2RXF0 380 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 SLC31A2O15432 143 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 LILRB3O75022 631 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 METTL15P1P0C7V9 234 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 SPP1P10451 314 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 RAB5AP20339 215 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms