RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 C9orf172C9J069 976 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 SMAD9O15198 467 aaKnown RBP9.95□□□□□ -0.82
CLPX-204ENST00000559152 RAB3DO95716 219 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 CD3DP04234 171 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 MEF2DQ14814 521 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 Q5BKY6 102 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 FAM27BQ5VT28 67 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 AWAT2Q6E213 333 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 LAMTOR1Q6IAA8 161 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 SEZ6L2Q6UXD5 910 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 YRDCQ86U90 279 aaKnown RBP9.95□□□□□ -0.82
CLPX-204ENST00000559152 ANGPTL5Q86XS5 388 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 ZIC4Q8N9L1 334 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 LILRB4Q8NHJ6 448 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 AQP3Q92482 292 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 ALX4Q9H161 411 aaPredicted RBP9.95□□□□□ -0.82
CLPX-204ENST00000559152 DLL4Q9NR61 685 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 GHRLQ9UBU3 117 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 FLVCR1Q9Y5Y0 555 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 ZNF736B4DX44 427 aaPredicted RBP9.95□□□□□ -0.82
CLPX-204ENST00000559152 PYCARD-AS1I3L0S3 204 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 MTRF1O75570 445 aaKnown RBP9.95□□□□□ -0.82
CLPX-204ENST00000559152 TRAPPC6AO75865 159 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 ALX3O95076 343 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 ANXA7P20073 488 aaKnown RBP9.95□□□□□ -0.82
CLPX-204ENST00000559152 C4BPBP20851 252 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 DNASE1P24855 282 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 DLSTP36957 453 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 SELENOPP49908 381 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 QRFPP83859 136 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 ECH1Q13011 328 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 ENDOGQ14249 297 aaKnown RBP9.95□□□□□ -0.82
CLPX-204ENST00000559152 ZMYND11Q15326 602 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 ZNF584Q8IVC4 421 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 OR51S1Q8NGJ8 323 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 OR2V1Q8NHB1 315 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 ASB13Q8WXK3 278 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 NABP1Q96AH0 204 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 THOC3Q96J01 351 aaKnown RBP9.95□□□□□ -0.82
CLPX-204ENST00000559152 FAM71F1Q96KD3 344 aaPredicted RBP9.95□□□□□ -0.82
CLPX-204ENST00000559152 IP6K3Q96PC2 410 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 SRXN1Q9BYN0 137 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 B4GALT7Q9UBV7 327 aa9.95□□□□□ -0.82
CLPX-204ENST00000559152 LRRC3CA6NJW4 275 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 DISC1C4P0D8 188 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 MASP2O00187 686 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 RAB27BO00194 218 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 MT-CO3P00414 261 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 CD74P04233 296 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 RLN1P04808 185 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 GIPP09681 153 aaPredicted RBP9.94□□□□□ -0.82
CLPX-204ENST00000559152 VSIG8P0DPA2 414 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 SLC2A1P11166 492 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 POU3F2P20265 443 aaPredicted RBP9.94□□□□□ -0.82
CLPX-204ENST00000559152 THBS4P35443 961 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 RAP2BP61225 183 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 ZNF260Q3ZCT1 412 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 PHYHD1Q5SRE7 291 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 ABHD17BQ5VST6 288 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 Q6ZTK2 550 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 GGNQ86UU5 652 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 ZNF101Q8IZC7 436 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 GPR137CQ8N3F9 429 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 PNLDC1Q8NA58 520 aaKnown RBP9.94□□□□□ -0.82
CLPX-204ENST00000559152 OR14K1Q8NGZ2 314 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 OR8S1Q8NH09 359 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 KCNG3Q8TAE7 436 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 CPT1CQ8TCG5 803 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 PSMF1Q92530 271 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 CPNE4Q96A23 557 aaPredicted RBP9.94□□□□□ -0.82
CLPX-204ENST00000559152 SEC22CQ9BRL7 303 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 LRFN1Q9P244 771 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 MGAT4CQ9UBM8 478 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 PCDHGA1Q9Y5H4 931 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 MEIS3P1A6NDR6 274 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 TMEM14DPA8MWL7 114 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 CDK2AP1O14519 115 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 IGLV3-1P01715 115 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 HCKP08631 526 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 ABOP16442 354 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 TBPP20226 339 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 GDF1P27539 372 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 OTX1P32242 354 aaPredicted RBP9.94□□□□□ -0.82
CLPX-204ENST00000559152 ZP1P60852 638 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 CACNA1CQ13936 2221 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 OR10K2Q6IF99 312 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 AAED1Q7RTV5 226 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 SLC36A1Q7Z2H8 476 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 PAQR4Q8N4S7 273 aaPredicted RBP9.94□□□□□ -0.82
CLPX-204ENST00000559152 ACBD4Q8NC06 268 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 CHST4Q8NCG5 386 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 OR52H1Q8NGJ2 320 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 OR2T35Q8NGX2 323 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 PP6455Q8WZ26 134 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 MS4A3Q96HJ5 214 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 GPR137Q96N19 417 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 FAM173AQ9BQD7 235 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 EXO5Q9H790 373 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 PLEK2Q9NYT0 353 aa9.94□□□□□ -0.82
CLPX-204ENST00000559152 MRPS28Q9Y2Q9 187 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms