RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 OR52W1Q6IF63 320 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 STEAP1BQ6NZ63 245 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 GLDNQ6ZMI3 551 aaPredicted RBP9.37□□□□□ -0.91
CUX1-217ENST00000558836 C17orf107Q6ZR85 190 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 TMED4Q7Z7H5 227 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 ZIC4Q8N9L1 334 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 CLEC1AQ8NC01 280 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 ADPRHL1Q8NDY3 354 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 OR5D14Q8NGL3 314 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 LILRB4Q8NHJ6 448 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 NUDCD2Q8WVJ2 157 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 SORCS2Q96PQ0 1159 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 HES7Q9BYE0 225 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 BANF2Q9H503 90 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 SLA2Q9H6Q3 261 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 TMEM138Q9NPI0 162 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 RHBDD3Q9Y3P4 386 aa9.37□□□□□ -0.91
CUX1-217ENST00000558836 B4E171 279 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 TMEM127O75204 238 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 PMS2P2O95744 297 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 GP1BAP07359 652 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 VSIG8P0DPA2 414 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 RAB3AP20336 220 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 TSPAN7P41732 249 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 ANGPT1Q15389 498 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 ELFN2Q5R3F8 820 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 DNM1P46Q6ZS02 220 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 LYPD6Q86Y78 171 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 GABRG1Q8N1C3 465 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 TMEM104Q8NE00 496 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 OR8H1Q8NGG4 311 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 GPX8Q8TED1 209 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 THOC3Q96J01 351 aaKnown RBP9.36□□□□□ -0.91
CUX1-217ENST00000558836 ALKBH3Q96Q83 286 aaPredicted RBP9.36□□□□□ -0.91
CUX1-217ENST00000558836 MEGF11A6BM72 1044 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 CXCL13O43927 109 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 CSF1P09603 554 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 OR3A4PP47883 348 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 RAG2P55895 527 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 SRYQ05066 204 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 METTL11BQ5VVY1 283 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 DHRS13Q6UX07 377 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 LILRB2Q8N423 598 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 ZBTB44Q8NCP5 570 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 C15orf40Q8WUR7 153 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 ZNF845Q96IR2 970 aaPredicted RBP9.36□□□□□ -0.91
CUX1-217ENST00000558836 PIGQQ9BRB3 760 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 SELENOIQ9C0D9 397 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 KLK13Q9UKR3 277 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 A0A087WZY1 265 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 G3V3Q6 166 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 RAB27BO00194 218 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 LDLRAD4O15165 306 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 TGM6O95932 706 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 AMY2AP04746 511 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 HCKP08631 526 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 AKAIN1P0CW23 69 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 ZNF81P51508 661 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 SCAND1P57086 179 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 RAC1P63000 192 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 LGALSLQ3ZCW2 172 aaPredicted RBP9.36□□□□□ -0.91
CUX1-217ENST00000558836 C1orf100Q5SVJ3 147 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 SFXN2Q96NB2 322 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 ULBP2Q9BZM5 246 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 EXO5Q9H790 373 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 PLA2G3Q9NZ20 509 aa9.36□□□□□ -0.91
CUX1-217ENST00000558836 A0A1B0GUH1 482 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 CDX4O14627 284 aaPredicted RBP9.35□□□□□ -0.91
CUX1-217ENST00000558836 CREBL2O60519 120 aaPredicted RBP9.35□□□□□ -0.91
CUX1-217ENST00000558836 MTRF1O75570 445 aaKnown RBP9.35□□□□□ -0.91
CUX1-217ENST00000558836 RAB3DO95716 219 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 CYC1P08574 325 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 GABRA1P14867 456 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 MSR1P21757 451 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 CFPP27918 469 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 CLDN15P56746 228 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 CARD18P57730 90 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 B3GALT5-AS1P59052 145 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 ENDOGQ14249 297 aaKnown RBP9.35□□□□□ -0.91
CUX1-217ENST00000558836 RBMS2Q15434 407 aaKnown RBP9.35□□□□□ -0.91
CUX1-217ENST00000558836 RSPO1Q2MKA7 263 aaPredicted RBP9.35□□□□□ -0.91
CUX1-217ENST00000558836 GLIPR1L1Q6UWM5 242 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 IDO2Q6ZQW0 420 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 PSMF1Q92530 271 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 FBXO17Q96EF6 278 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 PGAM5Q96HS1 289 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 CITED4Q96RK1 184 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 GPER1Q99527 375 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 GON7Q9BXV9 100 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 RANBP3Q9H6Z4 567 aaPredicted RBP9.35□□□□□ -0.91
CUX1-217ENST00000558836 CRLF2Q9HC73 371 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 NPDC1Q9NQX5 325 aaPredicted RBP9.35□□□□□ -0.91
CUX1-217ENST00000558836 PLEK2Q9NYT0 353 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 FBXO4Q9UKT5 387 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 LOC390937A0A1W2PQ73 354 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 LRRC3CA6NJW4 275 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 ERVH48-1M5A8F1 160 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 DHHO43323 396 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 MPIG6BO95866 241 aa9.35□□□□□ -0.91
CUX1-217ENST00000558836 CYB5AP00167 134 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms