RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 CPOQ8IVL8 374 aa12.91□□□□□ -0.34
RPL28-207ENST00000558815 ABHD6Q9BV23 337 aa12.91□□□□□ -0.34
RPL28-207ENST00000558815 TEX12Q9BXU0 123 aa12.91□□□□□ -0.34
RPL28-207ENST00000558815 GCM1Q9NP62 436 aa12.91□□□□□ -0.34
RPL28-207ENST00000558815 PAPOLBQ9NRJ5 636 aaKnown RBP12.91□□□□□ -0.34
RPL28-207ENST00000558815 TRAV20A0A0B4J274 112 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 SELENOFO60613 162 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 IGHV2-70P01814 119 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 OTX1P32242 354 aaPredicted RBP12.9□□□□□ -0.34
RPL28-207ENST00000558815 NAA10P41227 235 aaPredicted RBP12.9□□□□□ -0.34
RPL28-207ENST00000558815 RAD23AP54725 363 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 BTG1P62324 171 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 GRB2P62993 217 aaKnown RBP12.9□□□□□ -0.34
RPL28-207ENST00000558815 LCN2P80188 198 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 CDK5Q00535 292 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 OR8G1Q15617 311 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 PCK2Q16822 640 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 KLHL36Q8N4N3 616 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 BBS1Q8NFJ9 593 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 OR5K1Q8NHB7 308 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 DVL3Q92997 716 aaPredicted RBP12.9□□□□□ -0.34
RPL28-207ENST00000558815 UTP4Q969X6 686 aaKnown RBP12.9□□□□□ -0.34
RPL28-207ENST00000558815 AMELYQ99218 206 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 BRD7Q9NPI1 651 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 TVP23BQ9NYZ1 205 aa12.9□□□□□ -0.34
RPL28-207ENST00000558815 CD300LBA8K4G0 201 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 TMEM178BH3BS89 294 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 CIB2O75838 187 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 PNPP00491 289 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 H2BFMP0C1H6 154 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 CA6P23280 308 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 SLC15A1P46059 708 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 DAPP51397 102 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 ZMYND11Q15326 602 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 SNAPC1Q16533 368 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 TIGD6Q17RP2 521 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 GFOD2Q3B7J2 385 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 PRAMEF6Q5VXH4 476 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 CXXC5Q7LFL8 322 aaKnown RBP12.89□□□□□ -0.35
RPL28-207ENST00000558815 SHFQ7M4L6 423 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 AMIGO2Q86SJ2 522 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 TIGD4Q8IY51 512 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 SPICQ8N5J4 248 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 THEM6Q8WUY1 208 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 NRBF2Q96F24 287 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 SIGLEC11Q96RL6 698 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 ADAT1Q9BUB4 502 aaKnown RBP12.89□□□□□ -0.35
RPL28-207ENST00000558815 METTL17Q9H7H0 456 aaPredicted RBP12.89□□□□□ -0.35
RPL28-207ENST00000558815 SLC25A19Q9HC21 320 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 UFSP2Q9NUQ7 469 aa12.89□□□□□ -0.35
RPL28-207ENST00000558815 SVEP1Q4LDE5 3571 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 G3V2T6 193 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 IRF2P14316 349 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 CRISP1P54107 249 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 APOFQ13790 326 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 ATP6AP1Q15904 470 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 DCAF12L2Q5VW00 463 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 FAM57BQ71RH2 274 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.88□□□□□ -0.35
RPL28-207ENST00000558815 OR56B2PQ8NGI1 322 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 DNAJC9Q8WXX5 260 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 MMADHCQ9H3L0 296 aaPredicted RBP12.88□□□□□ -0.35
RPL28-207ENST00000558815 TOR3AQ9H497 397 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 MARCH7Q9H992 704 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 KRT84Q9NSB2 600 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 AP4S1Q9Y587 144 aa12.88□□□□□ -0.35
RPL28-207ENST00000558815 FBN1P35555 2871 aaKnown RBP12.87□□□□□ -0.35
RPL28-207ENST00000558815 ARHGAP32A7KAX9 2087 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 A0A0G2JMP0 313 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 A0A0X1KG70 313 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 PRODHO43272 600 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 XRCC2O43543 280 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 MITFO75030 526 aaPredicted RBP12.87□□□□□ -0.35
RPL28-207ENST00000558815 LYNP07948 512 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 MRPL3P09001 348 aaKnown RBP12.87□□□□□ -0.35
RPL28-207ENST00000558815 FASP25445 335 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 MDH2P40926 338 aaKnown RBP12.87□□□□□ -0.35
RPL28-207ENST00000558815 ZNF121P58317 390 aaPredicted RBP12.87□□□□□ -0.35
RPL28-207ENST00000558815 SEC61A1P61619 476 aaKnown RBP12.87□□□□□ -0.35
RPL28-207ENST00000558815 MAB21L1Q13394 359 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 PTGES3Q15185 160 aaKnown RBP12.87□□□□□ -0.35
RPL28-207ENST00000558815 FAM201AQ5SY85 155 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 FAHD1Q6P587 224 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 LRRC28Q86X40 367 aaPredicted RBP12.87□□□□□ -0.35
RPL28-207ENST00000558815 BOLLQ8N9W6 283 aaKnown RBP12.87□□□□□ -0.35
RPL28-207ENST00000558815 OR4M2Q8NGB6 313 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 OTOSQ8NHW6 89 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 RNF133Q8WVZ7 376 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 LRTOMTQ8WZ04 291 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 PGAM5Q96HS1 289 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 REPIN1Q9BWE0 567 aaKnown RBP12.87□□□□□ -0.35
RPL28-207ENST00000558815 SEMA6AQ9H2E6 1030 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 OCEL1Q9H607 264 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 PATZ1Q9HBE1 687 aaKnown RBP12.87□□□□□ -0.35
RPL28-207ENST00000558815 G6PC2Q9NQR9 355 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 METRNQ9UJH8 293 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 KLHDC2Q9Y2U9 406 aa12.87□□□□□ -0.35
RPL28-207ENST00000558815 LOC105371242A0A075B767 164 aa12.86□□□□□ -0.35
RPL28-207ENST00000558815 LRRC30A6NM36 301 aa12.86□□□□□ -0.35
RPL28-207ENST00000558815 IFNL4K9M1U5 179 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms