RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 SMPD3Q9NY59 655 aaPredicted RBP12.89□□□□□ -0.35
CPNE6-208ENST00000558795 UGT2A1Q9Y4X1 527 aa12.89□□□□□ -0.35
CPNE6-208ENST00000558795 RIIAD1A6NNX1 92 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 ZAR1LA6NP61 321 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 KNG1P01042 644 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 NGFP01138 241 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 IGHV4-38-2P0DP08 117 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 ZNF3P17036 446 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 CDKN2AP42771 156 aaKnown RBP12.88□□□□□ -0.35
CPNE6-208ENST00000558795 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.88□□□□□ -0.35
CPNE6-208ENST00000558795 OCLNQ16625 522 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 ZIK1Q3SY52 487 aaPredicted RBP12.88□□□□□ -0.35
CPNE6-208ENST00000558795 TMEM236Q5W0B7 351 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 ARL9Q6T311 187 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 BTNL3Q6UXE8 466 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 IQCF1Q8N6M8 205 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 ZNF283Q8N7M2 679 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 OR2Z1Q8NG97 314 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 OR4K13Q8NH42 304 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 PLEKHA8Q96JA3 519 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 OR2H1Q9GZK4 316 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 RASSF4Q9H2L5 321 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 TOR3AQ9H497 397 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 CMC2Q9NRP2 79 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 VSX1Q9NZR4 365 aaPredicted RBP12.88□□□□□ -0.35
CPNE6-208ENST00000558795 LRCH1Q9Y2L9 728 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 MMP24Q9Y5R2 645 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 TRRAPQ9Y4A5 3859 aa12.88□□□□□ -0.35
CPNE6-208ENST00000558795 A0A1B0GUS0 222 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 F5H0A9 414 aaPredicted RBP12.87□□□□□ -0.35
CPNE6-208ENST00000558795 CD80P33681 288 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 POLR2IP36954 125 aaKnown RBP12.87□□□□□ -0.35
CPNE6-208ENST00000558795 MDH2P40926 338 aaKnown RBP12.87□□□□□ -0.35
CPNE6-208ENST00000558795 PAX8Q06710 450 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 FMODQ06828 376 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 PSG7Q13046 419 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 CDK5R2Q13319 367 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 ZMYND11Q15326 602 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 FAM27BQ5VT28 67 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 SLX4IPQ5VYV7 408 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 DNM1P34Q6PK57 102 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 C9orf139Q6ZV77 190 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 PTCHD4Q6ZW05 846 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 MUC20Q8N307 709 aaPredicted RBP12.87□□□□□ -0.35
CPNE6-208ENST00000558795 NPEPL1Q8NDH3 523 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 ZNF555Q8NEP9 628 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 SDR9C7Q8NEX9 313 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 C4orf45Q96LM5 186 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 NMNAT3Q96T66 252 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 WNT5BQ9H1J7 359 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 TVP23BQ9NYZ1 205 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 PPP1R3CQ9UQK1 317 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 TIMM10BQ9Y5J6 103 aa12.87□□□□□ -0.35
CPNE6-208ENST00000558795 H0YJX3 145 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 SURF4O15260 269 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 ICMTO60725 284 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 CRYBA1P05813 215 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 PPIAL4GP0DN37 164 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 PAICSP22234 425 aaKnown RBP12.86□□□□□ -0.35
CPNE6-208ENST00000558795 LAP3P28838 519 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 EPHA2P29317 976 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 CRABP1P29762 137 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 RBMXP38159 391 aaKnown RBP12.86□□□□□ -0.35
CPNE6-208ENST00000558795 GUCA1AP43080 201 aaPredicted RBP12.86□□□□□ -0.35
CPNE6-208ENST00000558795 CDC42P60953 191 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 PCBD1P61457 104 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 SNAPC1Q16533 368 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 ZNF362Q5T0B9 420 aaPredicted RBP12.86□□□□□ -0.35
CPNE6-208ENST00000558795 C12orf73Q69YU5 71 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 SLC25A47Q6Q0C1 308 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 LRRN1Q6UXK5 716 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 SLC37A3Q8NCC5 494 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 NRG4Q8WWG1 115 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 WFDC12Q8WWY7 111 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 ZDHHC16Q969W1 377 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 HRASLS5Q96KN8 279 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 MBOAT4Q96T53 435 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 SSBP3Q9BWW4 388 aaPredicted RBP12.86□□□□□ -0.35
CPNE6-208ENST00000558795 SYT4Q9H2B2 425 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 BEX1Q9HBH7 125 aa12.86□□□□□ -0.35
CPNE6-208ENST00000558795 SOX21Q9Y651 276 aaPredicted RBP12.86□□□□□ -0.35
CPNE6-208ENST00000558795 IGKV1D-43A0A0B4J1Z2 117 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 TRAV40A0A0B4J280 105 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 LOC100130705A0A1B0GUX0 176 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 MDFIC2A0A1B0GVS7 189 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 CEACAM18A8MTB9 384 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 H7C1C5 153 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 M0QZ24 198 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 HOXA3O43365 443 aaPredicted RBP12.85□□□□□ -0.35
CPNE6-208ENST00000558795 SLC16A7O60669 478 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 KHDRBS3O75525 346 aaKnown RBP12.85□□□□□ -0.35
CPNE6-208ENST00000558795 ABHD16AO95870 558 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 CST2P09228 141 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 LCN6P62502 163 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 TTC23Q5W5X9 447 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 ZNF774Q6NX45 483 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 BRICD5Q6PL45 260 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 DHRSXQ8N5I4 330 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 KIR3DL3Q8N743 410 aa12.85□□□□□ -0.35
CPNE6-208ENST00000558795 OR4F5Q8NH21 305 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms