RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CD300CQ08708 224 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 KLRB1Q12918 225 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 TAF13Q15543 124 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 ZNF813Q6ZN06 617 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 Q6ZSR3 168 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 FAM57BQ71RH2 274 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 OR51D1Q8NGF3 324 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 SYNPRQ8TBG9 265 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 FGGYQ96C11 551 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 ZC3HAV1LQ96H79 300 aaKnown RBP11.33□□□□□ -0.6
SMAD3-207ENST00000558763 LYZL4Q96KX0 146 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 THAP7Q9BT49 309 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-207ENST00000558763 LINC00470Q9BZP3 86 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 SLC22A4Q9H015 551 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 SLCO5A1Q9H2Y9 848 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 GPR84Q9NQS5 396 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 SLC7A10Q9NS82 523 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 PAQR5Q9NXK6 330 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-207ENST00000558763 ZNF224Q9NZL3 707 aa11.33□□□□□ -0.6
SMAD3-207ENST00000558763 CGGBP1Q9UFW8 167 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-207ENST00000558763 MCTS1Q9ULC4 181 aaKnown RBP11.33□□□□□ -0.6
SMAD3-207ENST00000558763 NOSIPQ9Y314 301 aaKnown RBP11.33□□□□□ -0.6
SMAD3-207ENST00000558763 OR6C6A6NF89 314 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 GSTZ1O43708 216 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-207ENST00000558763 IGHG3P01860 377 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 SFTPCP11686 197 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 MNDAP41218 407 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 POU3F4P49335 361 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 GALK2Q01415 458 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 SPOCK1Q08629 439 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 RAB35Q15286 201 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 C1orf100Q5SVJ3 147 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 BAIAP2L2Q6UXY1 529 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 SERPINA12Q8IW75 414 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 ZNF283Q8N7M2 679 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 SMIM4Q8WVI0 70 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 RAB40AQ8WXH6 277 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 GCDHQ92947 438 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-207ENST00000558763 RFT1Q96AA3 541 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 AUNIPQ9H7T9 357 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 RBFOX1Q9NWB1 397 aaKnown RBP11.32□□□□□ -0.6
SMAD3-207ENST00000558763 CKLFQ9UBR5 152 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 CACNA1BQ00975 2339 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 RPL36A-HNRNPH2H7BZ11 118 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 LDLRAD4O15165 306 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 LYRM1O43325 122 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 SYNGR4O95473 234 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 TGM6O95932 706 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 IGHV3-9P01782 118 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 MMP7P09237 267 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-207ENST00000558763 PATE4P0C8F1 98 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 ZNF32P17041 273 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 CDK2P24941 298 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 BTCP35070 178 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 MAP2K3P46734 347 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 FOXG1P55316 489 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-207ENST00000558763 RAB11BQ15907 218 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 ZNF774Q6NX45 483 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 ABHD12BQ7Z5M8 362 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-207ENST00000558763 UBE2J2Q8N2K1 259 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 SLC22A24Q8N4F4 322 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 FAM3DQ96BQ1 224 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 PPP1R14BQ96C90 147 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 SNRNP40Q96DI7 357 aaKnown RBP11.32□□□□□ -0.6
SMAD3-207ENST00000558763 HDHD2Q9H0R4 259 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 PLEK2Q9NYT0 353 aa11.32□□□□□ -0.6
SMAD3-207ENST00000558763 SVILO95425 2214 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 A0A0B4J293 547 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 TMEM272A0A1B0GTI8 110 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 A0A1B0GVI7 797 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 CIB4A0PJX0 185 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 F5H5K5 113 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 M0R135 149 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 MRPL33O75394 65 aaKnown RBP11.31□□□□□ -0.6
SMAD3-207ENST00000558763 CD3GP09693 182 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 ABOP16442 354 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 ART1P52961 327 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 NRN1LQ496H8 165 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 GLYATL3Q5SZD4 288 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 SFRP5Q5T4F7 317 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 DNM1P46Q6ZS02 220 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 ZNF627Q7L945 461 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 RNF144BQ7Z419 303 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 ADGRE4PQ86SQ3 457 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 ZNF554Q86TJ5 538 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 GLCCI1Q86VQ1 547 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 SKA3Q8IX90 412 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 OR5AS1Q8N127 324 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 C19orf18Q8NEA5 215 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 OR14K1Q8NGZ2 314 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 ZNF799Q96GE5 643 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 ZFP3Q96NJ6 502 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 WNT5BQ9H1J7 359 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 MMP28Q9H239 520 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 EMC3Q9P0I2 261 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 MRPS7Q9Y2R9 242 aaKnown RBP11.31□□□□□ -0.6
SMAD3-207ENST00000558763 ZFYVE26Q68DK2 2539 aa11.31□□□□□ -0.6
SMAD3-207ENST00000558763 A0A0U1RQV5 110 aa11.3□□□□□ -0.6
SMAD3-207ENST00000558763 LOC100289279A0A1B0GTE1 492 aa11.3□□□□□ -0.6
SMAD3-207ENST00000558763 MEGF11A6BM72 1044 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms