RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 TEX13CA0A0J9YWL9 993 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 OR6C65A6NJZ3 312 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 ZNF99A8MXY4 864 aaPredicted RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 H3BNX3 289 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 HSPB6O14558 160 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 PPP1R3DO95685 299 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 MT-ATP6P00846 226 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 IFNA14P01570 189 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 IL1AP01583 271 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 IGKV3-15P01624 115 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 IFNW1P05000 195 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 H1F0P07305 194 aaKnown RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 OR4A8P0C604 315 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 CLUP10909 449 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 CTLA4P16410 223 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 ZNF32P17041 273 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 LAP3P28838 519 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 PEX19P40855 299 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 WNT5AP41221 380 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 RBM34P42696 430 aaKnown RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 ZNF133P52736 654 aaPredicted RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 CDH11P55287 796 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 UBE2NP61088 152 aaKnown RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 RPL27P61353 136 aaKnown RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 RPS4XP62701 263 aaKnown RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 PSG4Q00888 419 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.61□□□□□ -1.83
SPG11-211ENST00000558561 ENDOGQ14249 297 aaKnown RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 CLEC12BQ2HXU8 276 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 ZNF260Q3ZCT1 412 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 ZBED5Q49AG3 693 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 CCDC92Q53HC0 331 aaPredicted RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 MESTQ5EB52 335 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 FGD3Q5JSP0 725 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 SPATA46Q5T0L3 261 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 GKAP1Q5VSY0 366 aaPredicted RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 AWAT2Q6E213 333 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 ZNF770Q6IQ21 691 aaPredicted RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 ACSM5Q6NUN0 579 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 ZNF774Q6NX45 483 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 TRPM8Q7Z2W7 1104 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 FAM122BQ7Z309 247 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 NANOGNBQ7Z5D8 188 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 OAFQ86UD1 273 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 P2RY8Q86VZ1 359 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 ZDHHC21Q8IVQ6 265 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 CDK20Q8IZL9 346 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 OFCC1Q8IZS5 231 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 MUC15Q8N387 334 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 SVOPLQ8N434 492 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 ZNF525Q8N782 197 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 OR51L1Q8NGJ5 315 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 OR4Q3Q8NH05 313 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 OR4K13Q8NH42 304 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 CANT1Q8WVQ1 401 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 GEMIN6Q8WXD5 167 aaKnown RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 ACOT11Q8WXI4 607 aaPredicted RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 PIGTQ969N2 578 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 LRR1Q96L50 414 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 NSMCE2Q96MF7 247 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 EPYCQ99645 322 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 NIPSNAP1Q9BPW8 284 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 DHRS9Q9BPW9 319 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 KATNB1Q9BVA0 655 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 ZNF416Q9BWM5 594 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 HCAR1Q9BXC0 346 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 MRPL37Q9BZE1 423 aaKnown RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 ULBP2Q9BZM5 246 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 NSRP1Q9H0G5 558 aaKnown RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 WNT5BQ9H1J7 359 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 TPK1Q9H3S4 243 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 RERGLQ9H628 205 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 MED20Q9H944 212 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 NTN4Q9HB63 628 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 IL1RAPQ9NPH3 570 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 BEX4Q9NWD9 120 aaPredicted RBP3.61□□□□□ -1.83
SPG11-211ENST00000558561 DCAF16Q9NXF7 216 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 AMDHD2Q9Y303 409 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 DYSFO75923 2080 aa3.61□□□□□ -1.83
SPG11-211ENST00000558561 A0A1W2PRG6 482 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 A0A1W2PRQ8 180 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 LRP5LA4QPB2 252 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 TVP23AA6NH52 213 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 NDUFAB1O14561 156 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 DOK2O60496 412 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 SLC16A7O60669 478 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 DCTN3O75935 186 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 GADD45GO95257 159 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 TFP02787 698 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 GYPBP06028 91 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 IGKV2-30P06310 120 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 CD14P08571 375 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 ADRA2AP08913 450 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 SAGP10523 405 aaPredicted RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 THRBP10828 461 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 PAX1P15863 534 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 HIST1H1CP16403 213 aaKnown RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 CCNOP22674 350 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 EPHA2P29317 976 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 IL2RGP31785 369 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms