RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 BMPERQ8N8U9 685 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 ZDHHC22Q8N966 263 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 DTWD2Q8NBA8 298 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 OR4D10Q8NGI6 311 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 OR8S1Q8NH09 359 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 NECAB3Q96P71 396 aaPredicted RBP6.45□□□□□ -1.38
VPS13C-206ENST00000558338 EMC6Q9BV81 110 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 KCNK15Q9H427 330 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 POFUT1Q9H488 388 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 CNTD2Q9H8S5 307 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 SEC61A2Q9H9S3 476 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 IFT46Q9NQC8 304 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 CA10Q9NS85 328 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 RHBDD3Q9Y3P4 386 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 LHFPL6Q9Y693 200 aa6.45□□□□□ -1.38
VPS13C-206ENST00000558338 CHCHD2Q9Y6H1 151 aaPredicted RBP6.45□□□□□ -1.38
VPS13C-206ENST00000558338 KNL1Q8NG31 2342 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 FREM3P0C091 2139 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 IGHV1-45A0A0A0MS14 117 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 A0A1B0GW55 424 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 MEIS3P1A6NDR6 274 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 GJE1A6NN92 205 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 SHISA8B8ZZ34 492 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 MCRIP1C9JLW8 97 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 MASP2O00187 686 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 SULT2B1O00204 365 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 DNPH1O43598 174 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 IL2RAP01589 272 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 APOC1P02654 83 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 GSTP1P09211 210 aaKnown RBP6.44□□□□□ -1.38
VPS13C-206ENST00000558338 DUX4L2P0CJ85 424 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 DUX4L3P0CJ86 424 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 DUX4L4P0CJ87 422 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 DUX4L5P0CJ88 424 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 DUX4L6P0CJ89 424 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 DUX4L7P0CJ90 424 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF35P13682 527 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 PPP3CBP16298 524 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 SSTR2P30874 369 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 S100A11P31949 105 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 SSR4P51571 173 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 DSCR4P56555 118 aaPredicted RBP6.44□□□□□ -1.38
VPS13C-206ENST00000558338 CSNK2A1P68400 391 aaPredicted RBP6.44□□□□□ -1.38
VPS13C-206ENST00000558338 POU4F3Q15319 338 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 HIST3H3Q16695 136 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF260Q3ZCT1 412 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 B3GNTL1Q67FW5 361 aaPredicted RBP6.44□□□□□ -1.38
VPS13C-206ENST00000558338 AWAT2Q6E213 333 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 LIN54Q6MZP7 749 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 FAHD2BQ6P2I3 314 aaPredicted RBP6.44□□□□□ -1.38
VPS13C-206ENST00000558338 CFAP77Q6ZQR2 320 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 TMPPEQ6ZT21 453 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 OVCH2Q7RTZ1 564 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 NAXDQ8IW45 347 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 MUC20Q8N307 709 aaPredicted RBP6.44□□□□□ -1.38
VPS13C-206ENST00000558338 C12orf45Q8N5I9 185 aaPredicted RBP6.44□□□□□ -1.38
VPS13C-206ENST00000558338 ESX1Q8N693 406 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 OR4D6Q8NGJ1 314 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 OR52B4Q8NGK2 314 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 OR10S1Q8NGN2 331 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 OR1J2Q8NGS2 313 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 FAHD2AQ96GK7 314 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 EDEM2Q9BV94 578 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 GSX2Q9BZM3 304 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 B3GNT4Q9C0J1 378 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 GAREM1Q9H706 876 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 DUX4Q9UBX2 424 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 FBXL2Q9UKC9 423 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 SEC16AO15027 2179 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 GON4LQ3T8J9 2241 aa6.44□□□□□ -1.38
VPS13C-206ENST00000558338 SZT2Q5T011 3432 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 KIF26BQ2KJY2 2108 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 TEX51A0A1B0GUA7 166 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 A0A1W2PNR3 127 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 RPS10-NUDT3A0A1W2PQS6 291 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 TMEM14DPA8MWL7 114 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 NTN3O00634 580 aaPredicted RBP6.43□□□□□ -1.38
VPS13C-206ENST00000558338 B3GALNT1O75752 331 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 MPC2O95563 127 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 CFIP05156 583 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 QDPRP09417 244 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 OR4E1P0C645 316 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 RPA2P15927 270 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 MSR1P21757 451 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 SDHBP21912 280 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 CTSSP25774 331 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 SFTPDP35247 375 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF93P35789 620 aaPredicted RBP6.43□□□□□ -1.38
VPS13C-206ENST00000558338 CSNK1A1P48729 337 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 CX3CR1P49238 355 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF133P52736 654 aaPredicted RBP6.43□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF121P58317 390 aaPredicted RBP6.43□□□□□ -1.38
VPS13C-206ENST00000558338 TAS2R31P59538 309 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 GK2Q14410 553 aaPredicted RBP6.43□□□□□ -1.38
VPS13C-206ENST00000558338 CSRP2Q16527 193 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 TMEM176BQ3YBM2 270 aaPredicted RBP6.43□□□□□ -1.38
VPS13C-206ENST00000558338 C10orf128Q5T292 105 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 FOXL2NBQ6ZUU3 175 aa6.43□□□□□ -1.38
VPS13C-206ENST00000558338 ABHD12BQ7Z5M8 362 aaPredicted RBP6.43□□□□□ -1.38
VPS13C-206ENST00000558338 TRAPPC6BQ86SZ2 158 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms