RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 MISPQ8IVT2 679 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 IFT46Q9NQC8 304 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 ALKBH4Q9NXW9 302 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 MPIG6BO95866 241 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 AFF3P51826 1226 aaKnown RBP15.7■□□□□ 0.1
XRCC3-218ENST00000557439 EMP2P54851 167 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 C5orf46Q6UWT4 87 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 TMPPEQ6ZT21 453 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 SLC51BQ86UW2 128 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 NAXDQ8IW45 347 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 UEVLDQ8IX04 471 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 SLC22A24Q8N4F4 322 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 SPERTQ8NA61 448 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 BVESQ8NE79 360 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 OR8B12Q8NGG6 310 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 MARCH1Q8TCQ1 289 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 VRK1Q99986 396 aaPredicted RBP15.7■□□□□ 0.1
XRCC3-218ENST00000557439 SEMA5BQ9P283 1151 aa15.7■□□□□ 0.1
XRCC3-218ENST00000557439 A8MXK9 166 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 RAB3AP20336 220 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 ZNF121P58317 390 aaPredicted RBP15.69■□□□□ 0.1
XRCC3-218ENST00000557439 IL13RA1P78552 427 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 ELP2Q6IA86 826 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 GLIPR1L1Q6UWM5 242 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 ROBO4Q8WZ75 1007 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 SLCO5A1Q9H2Y9 848 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 GPR84Q9NQS5 396 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 A0A1W2PQM1 296 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 C9orf170A2RU37 121 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 RNF222A6NCQ9 220 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 FGF2P09038 288 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 PGA4P0DJD7 388 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 PGA3P0DJD8 388 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 ZNF20P17024 532 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 CALCRP30988 508 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 PLAC9Q5JTB6 97 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 JMJD6Q6NYC1 403 aaPredicted RBP15.69■□□□□ 0.1
XRCC3-218ENST00000557439 WDR74Q6RFH5 385 aaPredicted RBP15.69■□□□□ 0.1
XRCC3-218ENST00000557439 LYG2Q86SG7 212 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 DTX1Q86Y01 620 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 ZNF471Q9BX82 626 aaPredicted RBP15.69■□□□□ 0.1
XRCC3-218ENST00000557439 PPA2Q9H2U2 334 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 KLHL13Q9P2N7 655 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 B3GALT5Q9Y2C3 310 aa15.69■□□□□ 0.1
XRCC3-218ENST00000557439 MASP2O00187 686 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 TRAF3IP2O43734 574 aaPredicted RBP15.68■□□□□ 0.1
XRCC3-218ENST00000557439 HPP00738 406 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 P2RY4P51582 365 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 TMEM176BQ3YBM2 270 aaPredicted RBP15.68■□□□□ 0.1
XRCC3-218ENST00000557439 C11orf87Q6NUJ2 197 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 DEGS2Q6QHC5 323 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 SLC25A42Q86VD7 318 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 OR5AS1Q8N127 324 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 OR5D14Q8NGL3 314 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 OR10K1Q8NGX5 313 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 MAFIPQ8WZ33 124 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 LIN37Q96GY3 246 aaPredicted RBP15.68■□□□□ 0.1
XRCC3-218ENST00000557439 TMEM41AQ96HV5 264 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 TGIF2Q9GZN2 237 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 SESN1Q9Y6P5 492 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 C13orf42A0A1B0GVH6 325 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 G3V3Y1 287 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 ZNF208O43345 1280 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 RAD51DO75771 328 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 CD8AP01732 235 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 RAB6AP20340 208 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 DLSTP36957 453 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 BAMBIQ13145 260 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 CLVS2Q5SYC1 327 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 UNQ6126/PRO20091Q6UXV3 157 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 FAM57BQ71RH2 274 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 HDDC2Q7Z4H3 204 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 OR10R2Q8NGX6 335 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 PRRT1Q99946 306 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 CRB3Q9BUF7 120 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 LPAR5Q9H1C0 372 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 MYOTQ9UBF9 498 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 TNFSF18Q9UNG2 199 aa15.68■□□□□ 0.1
XRCC3-218ENST00000557439 ZNF17P17021 662 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 CCL7P80098 99 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 NOXO1Q8NFA2 376 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 NUBPLQ8TB37 319 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 FOXRED1Q96CU9 486 aaPredicted RBP15.67■□□□□ 0.1
XRCC3-218ENST00000557439 MRPS24Q96EL2 167 aaKnown RBP15.67■□□□□ 0.1
XRCC3-218ENST00000557439 SHARPINQ9H0F6 387 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 COMMD9Q9P000 198 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 SRPK3Q9UPE1 567 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 WIF1Q9Y5W5 379 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 ADAMTS9Q9P2N4 1935 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 IGLV3-12A0A075B6K2 115 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 IGHV3-15A0A0B4J1V0 119 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 APOC3P02656 99 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 QDPRP09417 244 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 NPY4RP50391 375 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 MEF2DQ14814 521 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 BHLHE23Q8NDY6 225 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 OR2AJ1Q8NGZ0 328 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 MBD2Q9UBB5 411 aa15.67■□□□□ 0.1
XRCC3-218ENST00000557439 MRPS28Q9Y2Q9 187 aaKnown RBP15.67■□□□□ 0.1
XRCC3-218ENST00000557439 A0A0A6YYH2 397 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms