RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 Q6ZR03 302 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 CBR4Q8N4T8 237 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 OR52H1Q8NGJ2 320 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 OR8J1Q8NGP2 316 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 SPRYD4Q8WW59 207 aaPredicted RBP10.6□□□□□ -0.71
SLIRP-209ENST00000557342 TRUB1Q8WWH5 349 aaKnown RBP10.6□□□□□ -0.71
SLIRP-209ENST00000557342 ASB17Q8WXJ9 295 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 TIMD4Q96H15 378 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 IL4I1Q96RQ9 567 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 AMELYQ99218 206 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 CNN2Q99439 309 aaKnown RBP10.6□□□□□ -0.71
SLIRP-209ENST00000557342 SLC30A2Q9BRI3 323 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 REPIN1Q9BWE0 567 aaKnown RBP10.6□□□□□ -0.71
SLIRP-209ENST00000557342 SLC22A4Q9H015 551 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 OR10A2Q9H208 303 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 IMPAD1Q9NX62 359 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 HAO2Q9NYQ3 351 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 N6AMT1Q9Y5N5 214 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 IFNL4K9M1U5 179 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 M0R129 80 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 LILRA1O75019 489 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 BAG2O95816 211 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 MRPL3P09001 348 aaKnown RBP10.59□□□□□ -0.71
SLIRP-209ENST00000557342 IGHV4-31P0DP07 118 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 SLC2A1P11166 492 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 CFL1P23528 166 aaKnown RBP10.59□□□□□ -0.71
SLIRP-209ENST00000557342 DDOSTP39656 456 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 SRP9P49458 86 aaKnown RBP10.59□□□□□ -0.71
SLIRP-209ENST00000557342 ZNF121P58317 390 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-209ENST00000557342 ZNF92Q03936 586 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 POU4F2Q12837 409 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 TMED1Q13445 227 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 TIGD6Q17RP2 521 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 ZBTB49Q6ZSB9 765 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 KRT77Q7Z794 578 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 PEG10Q86TG7 708 aaKnown RBP10.59□□□□□ -0.71
SLIRP-209ENST00000557342 BHLHE23Q8NDY6 225 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 FAM81AQ8TBF8 368 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 CCL17Q92583 94 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 RAB1CQ92928 201 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 RFKQ969G6 155 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 SPSB4Q96A44 273 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 EME1Q96AY2 570 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 HRASLS5Q96KN8 279 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 MROQ9BYG7 248 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 RGCCQ9H4X1 137 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 YAE1D1Q9NRH1 226 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 WARS2Q9UGM6 360 aaKnown RBP10.59□□□□□ -0.71
SLIRP-209ENST00000557342 ABCA1O95477 2261 aa10.59□□□□□ -0.71
SLIRP-209ENST00000557342 A0A1B0GWJ7 208 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 LRP5LA4QPB2 252 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 CD300LBA8K4G0 201 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF254O75437 659 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 HTR1FP30939 366 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 DCTDP32321 178 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 PSMA6P60900 246 aaKnown RBP10.58□□□□□ -0.72
SLIRP-209ENST00000557342 TRIP10Q15642 601 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 SNCBQ16143 134 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 ZIK1Q3SY52 487 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-209ENST00000557342 C6orf52Q5T4I8 152 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 LRRN1Q6UXK5 716 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 FAM57BQ71RH2 274 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 PRSS45Q7RTY3 260 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 BCDIN3DQ7Z5W3 292 aaKnown RBP10.58□□□□□ -0.72
SLIRP-209ENST00000557342 OR2AE1Q8NHA4 323 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 ITLN1Q8WWA0 313 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 REEP6Q96HR9 211 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 PGAM5Q96HS1 289 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 OR2V2Q96R30 315 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 ADGRL4Q9HBW9 690 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 DNAJC27Q9NZQ0 273 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 MRPL15Q9P015 296 aaKnown RBP10.58□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF391Q9UJN7 358 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 KLHDC2Q9Y2U9 406 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 LRP12Q9Y561 859 aa10.58□□□□□ -0.72
SLIRP-209ENST00000557342 ACOD1A6NK06 481 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 A8MV72 311 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF670-ZNF695F2Z2N8 137 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 GMDSO60547 372 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 SBK2P0C263 348 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 RIDAP52758 137 aaKnown RBP10.57□□□□□ -0.72
SLIRP-209ENST00000557342 HCCSP53701 268 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 ROM1Q03395 351 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 MZT1Q08AG7 82 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 MEDAGQ5VYS4 303 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 FAM166AQ6J272 317 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 KLBQ86Z14 1044 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 SLC35F2Q8IXU6 374 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF679Q8IYX0 411 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 CELF2-AS1Q8N7Q2 184 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 OR10AD1Q8NGE0 317 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 CLDND2Q8NHS1 167 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 SGK3Q96BR1 496 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 MEGF10Q96KG7 1140 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 OR8B4Q96RC9 309 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 DCLRE1BQ9H816 532 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 BRD7Q9NPI1 651 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 C8orf4Q9NR00 106 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 TMEM106BQ9NUM4 274 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 CLN6Q9NWW5 311 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms