RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 SLC22A4Q9H015 551 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 CLN8Q9UBY8 286 aa11.85□□□□□ -0.51
SNX6-210ENST00000557341 TRAV40A0A0B4J280 105 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 TVP23AA6NH52 213 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 PHYHO14832 338 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 FAM20BO75063 409 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 SPARCP09486 303 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 PRTN3P24158 256 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 CD80P33681 288 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 PMELP40967 661 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 FOXL1Q12952 345 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 SNAI3Q3KNW1 292 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 PRAMEF6Q5VXH4 476 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 ZNF770Q6IQ21 691 aaPredicted RBP11.84□□□□□ -0.51
SNX6-210ENST00000557341 LYPD4Q6UWN0 246 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 DCXRQ7Z4W1 244 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 PIGWQ7Z7B1 504 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 LNX2Q8N448 690 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 AQP11Q8NBQ7 271 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 SLC37A3Q8NCC5 494 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 OR51L1Q8NGJ5 315 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 OR9Q1Q8NGQ5 310 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 OR2AE1Q8NHA4 323 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 RAB40AQ8WXH6 277 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 UPRTQ96BW1 309 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 COPS4Q9BT78 406 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 MUC13Q9H3R2 512 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 OPA3Q9H6K4 179 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 MAGIXQ9H6Y5 334 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 BAIAP2Q9UQB8 552 aa11.84□□□□□ -0.51
SNX6-210ENST00000557341 GGT3PA6NGU5 568 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 CD300LBA8K4G0 201 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 ZNF878C9JN71 531 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 GMDSO60547 372 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 IGHV4-38-2P0DP08 117 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 HKR1P10072 659 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 PSKH1P11801 424 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 CA6P23280 308 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 FMO3P31513 532 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 ENTPD1P49961 510 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 GYS2P54840 703 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 ZNF92Q03936 586 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 BAMBIQ13145 260 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 CRMP1Q14194 572 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 MPPED2Q15777 294 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 KCNJ8Q15842 424 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 GLYATL3Q5SZD4 288 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 C9orf139Q6ZV77 190 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 BCL6BQ8N143 479 aaPredicted RBP11.83□□□□□ -0.52
SNX6-210ENST00000557341 ARHGAP24Q8N264 748 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 OR2T33Q8NG76 320 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 SGMS2Q8NHU3 365 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 ZNRF4Q8WWF5 429 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 DACT3Q96B18 629 aaPredicted RBP11.83□□□□□ -0.52
SNX6-210ENST00000557341 ZNF48Q96MX3 618 aaPredicted RBP11.83□□□□□ -0.52
SNX6-210ENST00000557341 DUX5Q96PT3 197 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 DDOQ99489 341 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 TSSK6Q9BXA6 273 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 FN3KRPQ9HA64 309 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 UFSP2Q9NUQ7 469 aa11.83□□□□□ -0.52
SNX6-210ENST00000557341 MRPL15Q9P015 296 aaKnown RBP11.83□□□□□ -0.52
SNX6-210ENST00000557341 TCRBV5S2A0A599 114 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 SOX14O95416 240 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 PLATP00750 562 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 GASTP01350 101 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 GYPBP06028 91 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 MTNR1AP48039 350 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 NPY4RP50391 375 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 PPP1R8Q12972 351 aaKnown RBP11.82□□□□□ -0.52
SNX6-210ENST00000557341 TAF13Q15543 124 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 PCK2Q16822 640 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 ZNF362Q5T0B9 420 aaPredicted RBP11.82□□□□□ -0.52
SNX6-210ENST00000557341 WDR25Q64LD2 544 aaPredicted RBP11.82□□□□□ -0.52
SNX6-210ENST00000557341 LCN8Q6JVE9 175 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 C19orf18Q8NEA5 215 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 OR6K6Q8NGW6 343 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 OR4Q3Q8NH05 313 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 SLC25A28Q96A46 364 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 SLAMF6Q96DU3 332 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 C1orf147Q96MC9 270 aaPredicted RBP11.82□□□□□ -0.52
SNX6-210ENST00000557341 TECTBQ96PL2 329 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 KCNJ15Q99712 375 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 NUDT16L1Q9BRJ7 211 aaKnown RBP11.82□□□□□ -0.52
SNX6-210ENST00000557341 MMADHCQ9H3L0 296 aaPredicted RBP11.82□□□□□ -0.52
SNX6-210ENST00000557341 REEP1Q9H902 201 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 TRIM36Q9NQ86 728 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 RNF7Q9UBF6 113 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 SAMHD1Q9Y3Z3 626 aaKnown RBP11.82□□□□□ -0.52
SNX6-210ENST00000557341 U3KQV3 271 aa11.82□□□□□ -0.52
SNX6-210ENST00000557341 IGHV3OR16-10A0A075B7F0 116 aa11.81□□□□□ -0.52
SNX6-210ENST00000557341 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.81□□□□□ -0.52
SNX6-210ENST00000557341 KIR2DS1A0A191URI9 304 aa11.81□□□□□ -0.52
SNX6-210ENST00000557341 CLDN34H7C241 214 aa11.81□□□□□ -0.52
SNX6-210ENST00000557341 XRCC2O43543 280 aa11.81□□□□□ -0.52
SNX6-210ENST00000557341 SPRY1O43609 319 aaPredicted RBP11.81□□□□□ -0.52
SNX6-210ENST00000557341 ENSAO43768 121 aaKnown RBP11.81□□□□□ -0.52
SNX6-210ENST00000557341 PTBP3O95758 552 aaKnown RBP11.81□□□□□ -0.52
SNX6-210ENST00000557341 IFNGP01579 166 aa11.81□□□□□ -0.52
SNX6-210ENST00000557341 RNASE1P07998 156 aaKnown RBP11.81□□□□□ -0.52
SNX6-210ENST00000557341 ZNF3P17036 446 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms