RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 UFSP2Q9NUQ7 469 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 RNF7Q9UBF6 113 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 SOX21Q9Y651 276 aaPredicted RBP13.25□□□□□ -0.29
TUBB3-213ENST00000557262 DOCK11Q5JSL3 2073 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 POM121CA8CG34 1229 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 PHYHO14832 338 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 GMDSO60547 372 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 PYCR1P32322 319 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 PSMB10P40306 273 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 BPIFB3P59826 476 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 IL13RA1P78552 427 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 PRR31Q5SQ13 230 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 PRAMEF6Q5VXH4 476 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 C16orf87Q6PH81 154 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 LINC00471Q8N535 108 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 PLPP7Q8NBV4 271 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 C19orf18Q8NEA5 215 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 PROKR2Q8NFJ6 384 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 OR52L1Q8NGH7 329 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 OR10S1Q8NGN2 331 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 OR2T4Q8NH00 348 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 EGLN3Q9H6Z9 239 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 FN3KRPQ9HA64 309 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 IL20Q9NYY1 176 aa13.24□□□□□ -0.29
TUBB3-213ENST00000557262 TRAV40A0A0B4J280 105 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 GGT3PA6NGU5 568 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 TVP23AA6NH52 213 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 BHLHE40O14503 412 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 WIPF1O43516 503 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 PTBP3O95758 552 aaKnown RBP13.23□□□□□ -0.29
TUBB3-213ENST00000557262 OTX1P32242 354 aaPredicted RBP13.23□□□□□ -0.29
TUBB3-213ENST00000557262 RPS27P42677 84 aaKnown RBP13.23□□□□□ -0.29
TUBB3-213ENST00000557262 NPY4RP50391 375 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 ZNF92Q03936 586 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 KCNJ8Q15842 424 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 SNAI3Q3KNW1 292 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 SPATS1Q496A3 300 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 ZNF362Q5T0B9 420 aaPredicted RBP13.23□□□□□ -0.29
TUBB3-213ENST00000557262 DRAM2Q6UX65 266 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 CYB561A3Q8NBI2 242 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 ZNRF4Q8WWF5 429 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 PRDM13Q9H4Q3 707 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 UNKLQ9H9P5 680 aaKnown RBP13.23□□□□□ -0.29
TUBB3-213ENST00000557262 ERVK-18Q9QC07 812 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 TAGLN3Q9UI15 199 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 CDH10Q9Y6N8 788 aa13.23□□□□□ -0.29
TUBB3-213ENST00000557262 LGALS8O00214 317 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 TNFRSF11BO00300 401 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 ATP8B1O43520 1251 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 ENSAO43768 121 aaKnown RBP13.22□□□□□ -0.29
TUBB3-213ENST00000557262 GASTP01350 101 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 LIPFP07098 398 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 FGF12P61328 243 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 CD276Q5ZPR3 534 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 SFRP4Q6FHJ7 346 aaPredicted RBP13.22□□□□□ -0.29
TUBB3-213ENST00000557262 C16orf89Q6UX73 402 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 DCXRQ7Z4W1 244 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 SPERTQ8NA61 448 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 OR4C15Q8NGM1 316 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 OR2AE1Q8NHA4 323 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 ZDHHC16Q969W1 377 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 TRIM15Q9C019 465 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 ARL8BQ9NVJ2 186 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 MRPL15Q9P015 296 aaKnown RBP13.22□□□□□ -0.29
TUBB3-213ENST00000557262 LYVE1Q9Y5Y7 322 aa13.22□□□□□ -0.29
TUBB3-213ENST00000557262 PKD1L1Q8TDX9 2849 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 TNFRSF13BO14836 293 aaPredicted RBP13.21□□□□□ -0.29
TUBB3-213ENST00000557262 NDUFA2O43678 99 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 FMO3P31513 532 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 TAF13Q15543 124 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 DEFB112Q30KQ8 113 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 GLYATL3Q5SZD4 288 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 GPR157Q5UAW9 335 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 BRD3OSQ6XYD6 125 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 RASSF6Q6ZTQ3 369 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 DEFB107AQ8IZN7 70 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 BOLLQ8N9W6 283 aaKnown RBP13.21□□□□□ -0.29
TUBB3-213ENST00000557262 SLC37A3Q8NCC5 494 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 OR9Q2Q8NGE9 314 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 OR51L1Q8NGJ5 315 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 KCNJ15Q99712 375 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 BTBD10Q9BSF8 475 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 ADAT1Q9BUB4 502 aaKnown RBP13.21□□□□□ -0.29
TUBB3-213ENST00000557262 TRIM36Q9NQ86 728 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 CENPMQ9NSP4 180 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 NDE1Q9NXR1 346 aa13.21□□□□□ -0.29
TUBB3-213ENST00000557262 TRRAPQ9Y4A5 3859 aa13.21□□□□□ -0.3
TUBB3-213ENST00000557262 TRAV38-1A0A0B4J264 116 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 MDFIC2A0A1B0GVS7 189 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 C5orf63A6NC05 138 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 C22orf46C9J442 243 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 ZNF593O00488 134 aaPredicted RBP13.2□□□□□ -0.3
TUBB3-213ENST00000557262 HOXA3O43365 443 aaPredicted RBP13.2□□□□□ -0.3
TUBB3-213ENST00000557262 CCNB2O95067 398 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 ANOS1P23352 680 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 ENTPD1P49961 510 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 PRKXP51817 358 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 HOXA4Q00056 320 aaPredicted RBP13.2□□□□□ -0.3
TUBB3-213ENST00000557262 MZT1Q08AG7 82 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 OR8B8Q15620 311 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms