RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 RNF141Q8WVD5 230 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 NUDT22Q9BRQ3 303 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 TMEM106CQ9BVX2 250 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 DUSP15Q9H1R2 295 aaPredicted RBP10.13□□□□□ -0.79
SRP54-213ENST00000556994 BANF2Q9H503 90 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 PDE7BQ9NP56 450 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 DZANK1Q9NVP4 752 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 PIAS3Q9Y6X2 628 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 RTTNQ86VV8 2226 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 WDR87Q6ZQQ6 2873 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 SHISA8B8ZZ34 492 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 NPIPA5E9PKD4 350 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 SOCS1O15524 211 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 FAM157CP0CG43 387 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 SLC2A1P11166 492 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 ABOP16442 354 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 BCKDHBP21953 392 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 EMP2P54851 167 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 CTAG1AP78358 180 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 COL13A1Q5TAT6 717 aaPredicted RBP10.13□□□□□ -0.79
SRP54-213ENST00000556994 ZNF585AQ6P3V2 769 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 RAB11FIP2Q7L804 512 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 HOGA1Q86XE5 327 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 C7orf61Q8IZ16 206 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 SLC22A24Q8N4F4 322 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 STOML3Q8TAV4 291 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 PBOV1Q9GZY1 135 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 C5orf66Q9H5L9 145 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 CUTCQ9NTM9 273 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 FAM206AQ9NX38 181 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 NPIPA1Q9UND3 350 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 SDK1Q7Z5N4 2213 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 MPIG6BO95866 241 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 SPP1P10451 314 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 ANOS1P23352 680 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 HSD11B1P28845 292 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 ZNF93P35789 620 aaPredicted RBP10.12□□□□□ -0.79
SRP54-213ENST00000556994 KCNJ3P48549 501 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 DLX2Q07687 328 aaPredicted RBP10.12□□□□□ -0.79
SRP54-213ENST00000556994 MST1LQ2TV78 715 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 GRINAQ7Z429 371 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 COMMD2Q86X83 199 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 FOXRED2Q8IWF2 684 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 SPAG16Q8N0X2 631 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 SLC30A7Q8NEW0 376 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 OR51F2Q8NH61 342 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 OR51E1Q8TCB6 317 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 THAP3Q8WTV1 239 aaPredicted RBP10.12□□□□□ -0.79
SRP54-213ENST00000556994 RLN3Q8WXF3 142 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 ASB10Q8WXI3 467 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 TMEM230Q96A57 120 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 SLAMF6Q96DU3 332 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 TMEM41AQ96HV5 264 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 ZNF285Q96NJ3 590 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 WWTR1Q9GZV5 400 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 TMEM100Q9NV29 134 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 UQCC1Q9NVA1 299 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 VDAC3Q9Y277 283 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 ASXL3Q9C0F0 2248 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 FTCDNL1E5RQL4 147 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 BPNT1O95861 308 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 IGHMP01871 453 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 OPN1LWP04000 364 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 CRYBA1P05813 215 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 MPZP25189 248 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 HOXA1P49639 335 aaPredicted RBP10.12□□□□□ -0.79
SRP54-213ENST00000556994 CLDN6P56747 220 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 GFOD2Q3B7J2 385 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 ZNF528Q3MIS6 628 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 AKIRIN2Q53H80 203 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 PLAC9Q5JTB6 97 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 C1orf189Q5VU69 101 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 DHRS7BQ6IAN0 325 aaPredicted RBP10.12□□□□□ -0.79
SRP54-213ENST00000556994 FAHD2BQ6P2I3 314 aaPredicted RBP10.12□□□□□ -0.79
SRP54-213ENST00000556994 GLIPR1L1Q6UWM5 242 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 CLEC18BQ6UXF7 455 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 TERB2Q8NHR7 220 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 C11orf40Q8WZ69 217 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 FAHD2AQ96GK7 314 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 OR10C1Q96KK4 312 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 MESP1Q9BRJ9 268 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 NMES1Q9C002 83 aa10.12□□□□□ -0.79
SRP54-213ENST00000556994 MED12Q93074 2177 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 IGKV3D-11A0A0A0MRZ8 115 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 IGHV3-20A0A0C4DH32 117 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 H3BML4 177 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 SDCBPO00560 298 aaPredicted RBP10.11□□□□□ -0.79
SRP54-213ENST00000556994 AGPAT2O15120 278 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 ZNF354AO60765 605 aaPredicted RBP10.11□□□□□ -0.79
SRP54-213ENST00000556994 RAD51DO75771 328 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 HTR3BO95264 441 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 ELAVL1Q15717 326 aaKnown RBP10.11□□□□□ -0.79
SRP54-213ENST00000556994 TMEM128Q5BJH2 165 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.11□□□□□ -0.79
SRP54-213ENST00000556994 KLHL24Q6TFL4 600 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 LANCL3Q6ZV70 420 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 DTWD2Q8NBA8 298 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 OR5D14Q8NGL3 314 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 OR10S1Q8NGN2 331 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 RXFP4Q8TDU9 374 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms