RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 CD8AP01732 235 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 UROSP10746 265 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 MYL2P10916 166 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 NEFHP12036 1026 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 SOAT1P35610 550 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 SRP14P37108 136 aaKnown RBP4.05□□□□□ -1.76
HIF1A-209ENST00000556827 HPCAL1P37235 193 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 MAGEA8P43361 318 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 MAGEA12P43365 314 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 ASMTP46597 345 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 NPBWR1P48145 328 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 ZNF83P51522 516 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 CCR4P51679 360 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 SNRPD2P62316 118 aaKnown RBP4.05□□□□□ -1.76
HIF1A-209ENST00000556827 MS4A2Q01362 244 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 FOXF1Q12946 379 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 SELENBP1Q13228 472 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 GGTLC2Q14390 218 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 UNC50Q53HI1 259 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.05□□□□□ -1.76
HIF1A-209ENST00000556827 FBXW9Q5XUX1 488 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 ZNF544Q6NX49 715 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 C3orf33Q6P1S2 294 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 UGT2A3Q6UWM9 527 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 APOOLQ6UXV4 268 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 C17orf107Q6ZR85 190 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 OR5W2Q8NH69 310 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 FBXO30Q8TB52 745 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 ACMSDQ8TDX5 336 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 APH1AQ96BI3 265 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 L3HYPDHQ96EM0 354 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 TMEM237Q96Q45 408 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 OR5B2Q96R09 309 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 STACQ99469 402 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 FMO2Q99518 471 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 CCT7Q99832 543 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 REEP4Q9H6H4 257 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 ZCCHC3Q9NUD5 404 aaKnown RBP4.05□□□□□ -1.76
HIF1A-209ENST00000556827 C1orf109Q9NX04 203 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 GIN1Q9NXP7 522 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 TAS2R16Q9NYV7 291 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 NINJ2Q9NZG7 142 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 DCDC2Q9UHG0 476 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 ZNF225Q9UK10 706 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 NOSIPQ9Y314 301 aaKnown RBP4.05□□□□□ -1.76
HIF1A-209ENST00000556827 POLR3HQ9Y535 204 aaPredicted RBP4.05□□□□□ -1.76
HIF1A-209ENST00000556827 HIVEP2P31629 2446 aa4.05□□□□□ -1.76
HIF1A-209ENST00000556827 FLNAP21333 2647 aaKnown RBP4.05□□□□□ -1.76
HIF1A-209ENST00000556827 MAP1AP78559 2803 aaPredicted RBP4.04□□□□□ -1.76
HIF1A-209ENST00000556827 NAV3Q8IVL0 2385 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 IGHV3-15A0A0B4J1V0 119 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 LOC390937A0A1W2PQ73 354 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 SHISA9B4DS77 424 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 B4DXG7 233 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 CFLARO15519 480 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 ZNF264O43296 627 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 TCF21O43680 179 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 EIF4E2O60573 245 aaKnown RBP4.04□□□□□ -1.76
HIF1A-209ENST00000556827 HMGN2P05204 90 aaKnown RBP4.04□□□□□ -1.76
HIF1A-209ENST00000556827 UQCRBP14927 111 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 PGCP20142 388 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 PTNP21246 168 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 IGHV1-2P23083 117 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 PAX7P23759 505 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 EDNRAP25101 427 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 GIFP27352 417 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 CCT3P49368 545 aaKnown RBP4.04□□□□□ -1.76
HIF1A-209ENST00000556827 PRPS1P60891 318 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 ZNF117Q03924 483 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 PAX8Q06710 450 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 CD300CQ08708 224 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 MERTKQ12866 999 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 PDK3Q15120 406 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 QPRTQ15274 297 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 TRADDQ15628 312 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 CCDC153Q494R4 210 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 FAM120AOSQ5T036 256 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 CCNJQ5T5M9 372 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 ATAD3BQ5T9A4 648 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 C12orf54Q6X4T0 127 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 TIFABQ6ZNK6 161 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 DNM1P46Q6ZS02 220 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 TMPPEQ6ZT21 453 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 EIF3MQ7L2H7 374 aaKnown RBP4.04□□□□□ -1.76
HIF1A-209ENST00000556827 ABHD12BQ7Z5M8 362 aaPredicted RBP4.04□□□□□ -1.76
HIF1A-209ENST00000556827 NATD1Q8N6N6 113 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 ZNF525Q8N782 197 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 ZNF433Q8N7K0 673 aaPredicted RBP4.04□□□□□ -1.76
HIF1A-209ENST00000556827 MNS1Q8NEH6 495 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 OR9Q2Q8NGE9 314 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 OR10G7Q8NGN6 311 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 ZNF563Q8TA94 476 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 PIGXQ8TBF5 258 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 GPR119Q8TDV5 335 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 C10orf105Q8TEF2 133 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 CDS1Q92903 461 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 CIDECQ96AQ7 238 aaPredicted RBP4.04□□□□□ -1.76
HIF1A-209ENST00000556827 TSSK3Q96PN8 268 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 KCNA7Q96RP8 456 aa4.04□□□□□ -1.76
HIF1A-209ENST00000556827 SOSTQ9BQB4 213 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms