RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 TRAV38-1A0A0B4J264 116 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 ZNF816-ZNF321PA0A0X1KG74 233 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 ELOVL7A1L3X0 281 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 LGALS8O00214 317 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 CDC42EP2O14613 210 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 ADAM20O43506 726 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 ZNF26P17031 533 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-223ENST00000556689 SLC7A2P52569 658 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 RAD23AP54725 363 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 RSPO1Q2MKA7 263 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-223ENST00000556689 LRRC23Q53EV4 343 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-223ENST00000556689 PRAMEF6Q5VXH4 476 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 TBPL2Q6SJ96 375 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 ZNF730Q6ZMV8 503 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 COLCA1Q6ZS62 124 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 TMPRSS11FQ6ZWK6 438 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 RRM2BQ7LG56 351 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 BOLLQ8N9W6 283 aaKnown RBP10.46□□□□□ -0.73
SHMT2-223ENST00000556689 ACOT11Q8WXI4 607 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-223ENST00000556689 LZICQ8WZA0 190 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 SYT4Q9H2B2 425 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 CNTD2Q9H8S5 307 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 TRIM36Q9NQ86 728 aa10.46□□□□□ -0.73
SHMT2-223ENST00000556689 NOP16Q9Y3C1 178 aaKnown RBP10.46□□□□□ -0.73
SHMT2-223ENST00000556689 C3orf80F5H4A9 247 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 G3V4G9 280 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 J3KTA2 159 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 FXYD1O00168 92 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 IMPA2O14732 288 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 TSPAN9O75954 239 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 ECDO95905 644 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-223ENST00000556689 SDHAP31040 664 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 GPR4P46093 362 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 CENPAP49450 140 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 PRSS12P56730 875 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 HIST1H3AP68431 136 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 HOXA4Q00056 320 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-223ENST00000556689 COX10Q12887 443 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 MALLQ13021 153 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 KRR1Q13601 381 aaKnown RBP10.45□□□□□ -0.74
SHMT2-223ENST00000556689 GK2Q14410 553 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-223ENST00000556689 OR8G1Q15617 311 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 OR8B8Q15620 311 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 BEAN1Q3B7T3 259 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 C11orf91Q3C1V1 193 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 HIST2H3PS2Q5TEC6 136 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 GPR139Q6DWJ6 353 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 DHRS7BQ6IAN0 325 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-223ENST00000556689 PGM2L1Q6PCE3 622 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 MBOAT2Q6ZWT7 520 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 HIST2H3AQ71DI3 136 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 BTN2A1Q7KYR7 527 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-223ENST00000556689 PDZD9Q8IXQ8 264 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 OFCC1Q8IZS5 231 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 PLPP7Q8NBV4 271 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 OR2T12Q8NG77 320 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 SPRYD4Q8WW59 207 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-223ENST00000556689 SLCO4A1Q96BD0 722 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 LRGUKQ96M69 825 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 THTPAQ9BU02 230 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 SLC22A4Q9H015 551 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 NUAK2Q9H093 628 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 MUC13Q9H3R2 512 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 VSX1Q9NZR4 365 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-223ENST00000556689 RPS6KA6Q9UK32 745 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 CAB39Q9Y376 341 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-223ENST00000556689 SNX13Q9Y5W8 968 aa10.45□□□□□ -0.74
SHMT2-223ENST00000556689 BTBD17A6NE02 478 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 FAM220BPB1ANY3 271 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 F5H5K5 113 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 FFAR1O14842 300 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 PTP4A3O75365 173 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 GYPAP02724 150 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 IFNW1P05000 195 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 T-ENOLP0DO92 83 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 CA6P23280 308 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 CRABP1P29762 137 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 TGFBR2P37173 567 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 EGR3Q06889 387 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 CDONQ4KMG0 1287 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 CORO6Q6QEF8 472 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 PGAP1Q75T13 922 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 NAA40Q86UY6 237 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 NPRL2Q8WTW4 380 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 CCDC124Q96CT7 223 aaKnown RBP10.44□□□□□ -0.74
SHMT2-223ENST00000556689 CDRT15Q96T59 188 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 PITX2Q99697 317 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 SMURF1Q9HCE7 757 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 NRIP3Q9NQ35 241 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 TAS2R1Q9NYW7 299 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 ABCD2Q9UBJ2 740 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 MAGEL2Q9UJ55 1249 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 IER3IP1Q9Y5U9 82 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 LHFPL6Q9Y693 200 aa10.44□□□□□ -0.74
SHMT2-223ENST00000556689 OOEPA6NGQ2 149 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 H0YHG0 523 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 SOCS2O14508 198 aa10.43□□□□□ -0.74
SHMT2-223ENST00000556689 DVL1O14640 695 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms