RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ACOT11Q8WXI4 607 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-220ENST00000556486 LZICQ8WZA0 190 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 MRI1Q9BV20 369 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 ANKRD19PQ9H560 264 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 BEX1Q9HBH7 125 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 SAR1AQ9NR31 198 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 IL20RAQ9UHF4 553 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 PPP1R3CQ9UQK1 317 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 AP3M1Q9Y2T2 418 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 TRAV27A0A087WT01 109 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 A0A087WUU8 490 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 TRAV40A0A0B4J280 105 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 ELOVL7A1L3X0 281 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 PRSS37A4D1T9 235 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 EFCAB9A8MZ26 197 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 TMEM178BH3BS89 294 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 CDC42EP2O14613 210 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 SLC22A2O15244 555 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 PIN1P1O15428 100 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 SGCEO43556 437 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 DOK2O60496 412 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 IFNW1P05000 195 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 ZNF26P17031 533 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-220ENST00000556486 MDH2P40926 338 aaKnown RBP8.35□□□□□ -1.07
SCFD1-220ENST00000556486 HTR5AP47898 357 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 RGS6P49758 472 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 RAB32Q13637 225 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 HABP2Q14520 560 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-220ENST00000556486 TIGD6Q17RP2 521 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 ZNF181Q2M3W8 571 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 DEFB112Q30KQ8 113 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 LRRC23Q53EV4 343 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-220ENST00000556486 MESTQ5EB52 335 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 MZT2BQ6NZ67 158 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 SLC27A4Q6P1M0 643 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 FBXW12Q6X9E4 464 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 MBOAT2Q6ZWT7 520 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 MICU2Q8IYU8 434 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 OR2Z1Q8NG97 314 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 OR51A7Q8NH64 312 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 PTP4A1Q93096 173 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 UPRTQ96BW1 309 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 GPX7Q96SL4 187 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-220ENST00000556486 GCM1Q9NP62 436 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 MBNL3Q9NUK0 354 aaKnown RBP8.35□□□□□ -1.07
SCFD1-220ENST00000556486 GID8Q9NWU2 228 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 C1RLQ9NZP8 487 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 MMP24Q9Y5R2 645 aa8.35□□□□□ -1.07
SCFD1-220ENST00000556486 CEACAM18A8MTB9 384 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 TIMM23O14925 209 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 PLATP00750 562 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 CRYBA1P05813 215 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 WNT2P09544 360 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 CTLA4P16410 223 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 SELEP16581 610 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 CD80P33681 288 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 HIST1H3AP68431 136 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 KCNMB1Q16558 191 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 ZBED5Q49AG3 693 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 ESCO2Q56NI9 601 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 HIST2H3PS2Q5TEC6 136 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 GPR139Q6DWJ6 353 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 CFAP161Q6P656 301 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 HIST2H3AQ71DI3 136 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 ARPINQ7Z6K5 226 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 ADCK1Q86TW2 530 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 IGFN1Q86VF2 1251 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 OR13C2Q8NGS9 318 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 OR4F5Q8NH21 305 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 RASD2Q96D21 266 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 CMBLQ96DG6 245 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 TPD52L3Q96J77 140 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 OR2V2Q96R30 315 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 FNDC11Q9BVV2 318 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 CHIAQ9BZP6 476 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 PRDM13Q9H4Q3 707 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 NMNAT1Q9HAN9 279 aaPredicted RBP8.34□□□□□ -1.07
SCFD1-220ENST00000556486 NRIP3Q9NQ35 241 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 TBC1D23Q9NUY8 699 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 VSX1Q9NZR4 365 aaPredicted RBP8.34□□□□□ -1.07
SCFD1-220ENST00000556486 OR5V1Q9UGF6 321 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 TMEM5Q9Y2B1 443 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 STARD10Q9Y365 291 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 ADAM18Q9Y3Q7 739 aa8.34□□□□□ -1.07
SCFD1-220ENST00000556486 A0A1W2PRQ8 180 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 H7C1C5 153 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 XKRYO14609 159 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 PTP4A3O75365 173 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 TXNDC12O95881 172 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 MTNR1AP48039 350 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 LCN6P62502 163 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 DGCR6Q14129 220 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 FAM189A2Q15884 450 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 TAF9Q16594 264 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 RUSC1-AS1Q66K80 236 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 LRRN1Q6UXK5 716 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 ZNF730Q6ZMV8 503 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 COLCA1Q6ZS62 124 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 CBLL1Q75N03 491 aa8.33□□□□□ -1.08
SCFD1-220ENST00000556486 VTCN1Q7Z7D3 282 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms