RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ANGPT2O15123 496 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 FCN3O75636 299 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 LCATP04180 440 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 CD33P20138 364 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 CRYBA2P53672 197 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 ST3GAL3Q11203 375 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 ECH1Q13011 328 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 KRR1Q13601 381 aaKnown RBP11.4□□□□□ -0.58
ACTN1-219ENST00000556432 NFYCQ13952 458 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 MEP1BQ16820 701 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 VMACQ2NL98 169 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 CORO6Q6QEF8 472 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 METAP1DQ6UB28 335 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-219ENST00000556432 ZNF826PQ6ZT77 177 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 OR51G2Q8NGK0 314 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 NKX3-1Q99801 234 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-219ENST00000556432 SSX3Q99909 188 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 SLC22A4Q9H015 551 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 FAM234AQ9H0X4 552 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 RAB18Q9NP72 206 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 NDUFAF1Q9Y375 327 aa11.4□□□□□ -0.58
ACTN1-219ENST00000556432 LOC100653049A0A140TA62 436 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 A0A1B0GW55 424 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 HTR3EA5X5Y0 456 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 K7EIL1 84 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 AHCYL1O43865 530 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 KRT34O76011 436 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 CD14P08571 375 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 DUX4L2P0CJ85 424 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 DUX4L3P0CJ86 424 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 DUX4L4P0CJ87 422 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 DUX4L5P0CJ88 424 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 DUX4L6P0CJ89 424 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 DUX4L7P0CJ90 424 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 CD28P10747 220 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 IGLL1P15814 213 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 IDH3AP50213 366 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 CD69Q07108 199 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 IKZF1Q13422 519 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 MICBQ29980 383 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 ANKDD1AQ495B1 522 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 DUX4L9Q6RFH8 374 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-219ENST00000556432 CCDC80Q76M96 950 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 NDUFA11Q86Y39 141 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 MREGQ8N565 214 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 LZICQ8WZA0 190 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 H1FXQ92522 213 aaKnown RBP11.39□□□□□ -0.59
ACTN1-219ENST00000556432 CCL13Q99616 98 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 PITX2Q99697 317 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 EBF4Q9BQW3 602 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 NPFFR1Q9GZQ6 430 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 RANBP3Q9H6Z4 567 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-219ENST00000556432 DUX4Q9UBX2 424 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 MAB21L2Q9Y586 359 aa11.39□□□□□ -0.59
ACTN1-219ENST00000556432 GGT3PA6NGU5 568 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 CD300LBA8K4G0 201 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 GMDSO60547 372 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 IFNA14P01570 189 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 ACSM4P0C7M7 580 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 GGT2P36268 569 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 GPR4P46093 362 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 SLC18A1P54219 525 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 FHL1Q13642 323 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 TNFAIP8L3Q5GJ75 292 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 NCR3LG1Q68D85 454 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 SLC36A1Q7Z2H8 476 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 LNX2Q8N448 690 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 PLPP7Q8NBV4 271 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 BEND2Q8NDZ0 799 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 ACOT11Q8WXI4 607 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-219ENST00000556432 RORBQ92753 470 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 TPD52L3Q96J77 140 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 PRRC1Q96M27 445 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 CCDC28BQ9BUN5 200 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 RHCGQ9UBD6 479 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 KAAG1Q9UBP8 84 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 LHFPL6Q9Y693 200 aa11.38□□□□□ -0.59
ACTN1-219ENST00000556432 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-219ENST00000556432 SOCS2O14508 198 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 IMPA2O14732 288 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 NDUFB3O43676 98 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 PEX14O75381 377 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 YAP1P46937 504 aaKnown RBP11.37□□□□□ -0.59
ACTN1-219ENST00000556432 UBE2E1P51965 193 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 ELF3P78545 371 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-219ENST00000556432 LRRC75BQ2VPJ9 315 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 LRRC23Q53EV4 343 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-219ENST00000556432 WDR38Q5JTN6 314 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 PGBD2Q6P3X8 592 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 ZNF730Q6ZMV8 503 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 COLCA1Q6ZS62 124 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 DPP10Q8N608 796 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 GCSAMQ8N6F7 178 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 FAM216BQ8N7L0 139 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 Q8N7P7 452 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 DTX3Q8N9I9 347 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 LY6G5BQ8NDX9 201 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 SLC7A13Q8TCU3 470 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 FNDC11Q9BVV2 318 aa11.37□□□□□ -0.59
ACTN1-219ENST00000556432 NUAK2Q9H093 628 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms