RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 ADAMTSL5Q6ZMM2 481 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 RBM43Q6ZSC3 357 aaKnown RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 ASRGL1Q7L266 308 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 KCTD9Q7L273 389 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 LINC00523Q86TU6 105 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 THOC6Q86W42 341 aaKnown RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 IFNEQ86WN2 208 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 LRRC6Q86X45 466 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 STHQ8IWL8 128 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 NAT8LQ8N9F0 302 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 OR8K3Q8NH51 312 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 PSMA8Q8TAA3 256 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 NUBPLQ8TB37 319 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 LRRC45Q96CN5 670 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 C11orf24Q96F05 449 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 CFAP36Q96G28 342 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 KIR2DL4Q99706 377 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 C1QTNF6Q9BXI9 259 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 FUT8Q9BYC5 575 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 NXF5Q9H1B4 397 aaKnown RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 ANKRA2Q9H9E1 313 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 ISG20L2Q9H9L3 353 aaKnown RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 PARVBQ9HBI1 364 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 LPAR2Q9HBW0 351 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 CENPMQ9NSP4 180 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 IFNKQ9P0W0 207 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 ZNF490Q9ULM2 529 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-234ENST00000555958 DHRS7Q9Y394 339 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 ZNF337Q9Y3M9 751 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 COL7A1Q02388 2944 aa3.12□□□□□ -1.91
ATXN3-234ENST00000555958 UBR4Q5T4S7 5183 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 IGLV8-61A0A075B6I0 122 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 NPIPA5A0A0B4J1W7 369 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 TMEM89A2RUT3 159 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 C9JVG2 144 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 LYNX1G3V0Z9 82 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 GOLGA8MH3BSY2 632 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 ABCD4O14678 606 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 TP53I11O14683 189 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 EMC8O43402 210 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 LYZL6O75951 148 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 SNX4O95219 450 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 PTMAP06454 111 aaKnown RBP3.11□□□□□ -1.91
ATXN3-234ENST00000555958 WNT2P09544 360 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 C1GALT1C1LP0DN25 315 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 LYNX1P0DP58 116 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 HNF1AP20823 631 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 CPN2P22792 545 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 ATP5A1P25705 553 aaKnown RBP3.11□□□□□ -1.91
ATXN3-234ENST00000555958 MAGEA1P43355 309 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 STXBP1P61764 594 aaKnown RBP3.11□□□□□ -1.91
ATXN3-234ENST00000555958 SKP1P63208 163 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 STX5Q13190 355 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 SLAMF1Q13291 335 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 RAB35Q15286 201 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 TRIP10Q15642 601 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 C2orf76Q3KRA6 126 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 TTLL9Q3SXZ7 439 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 KHDRBS2Q5VWX1 349 aaKnown RBP3.11□□□□□ -1.91
ATXN3-234ENST00000555958 ANKRD22Q5VYY1 191 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 DUPD1Q68J44 220 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 C11orf71Q6IPW1 123 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 SVOPLQ8N434 492 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 ACOT4Q8N9L9 421 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 RFESDQ8TAC1 157 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 RNF138Q8WVD3 245 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 C22orf15Q8WYQ4 148 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 HGDQ93099 445 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 ADIPOR1Q96A54 375 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 C16orf74Q96GX8 76 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 ZFP3Q96NJ6 502 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 KLHDC3Q9BQ90 382 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 AIF1LQ9BQI0 150 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 OSBPL11Q9BXB4 747 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 PCBD2Q9H0N5 130 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 OR51B5Q9H339 312 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 DSN1Q9H410 356 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 NARFLQ9H6Q4 476 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 DCLRE1BQ9H816 532 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 RNF122Q9H9V4 155 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 MIEF1Q9NQG6 463 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 ACOXLQ9NUZ1 547 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 MED11Q9P086 117 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 ERVK-18Q9QC07 812 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 LCMT1Q9UIC8 334 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 DKKL1Q9UK85 242 aa3.11□□□□□ -1.91
ATXN3-234ENST00000555958 MRPS33Q9Y291 106 aaKnown RBP3.11□□□□□ -1.91
ATXN3-234ENST00000555958 NPIPA7E9PJI5 369 aa3.1□□□□□ -1.91
ATXN3-234ENST00000555958 FMO6PO60774 539 aa3.1□□□□□ -1.91
ATXN3-234ENST00000555958 BANF1O75531 89 aa3.1□□□□□ -1.91
ATXN3-234ENST00000555958 GCM2O75603 506 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-234ENST00000555958 CBR3O75828 277 aa3.1□□□□□ -1.91
ATXN3-234ENST00000555958 HSPB1P04792 205 aaKnown RBP3.1□□□□□ -1.91
ATXN3-234ENST00000555958 SFTPBP07988 381 aa3.1□□□□□ -1.91
ATXN3-234ENST00000555958 HIST1H2AGP0C0S8 130 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-234ENST00000555958 NPIPA8P0DM63 369 aa3.1□□□□□ -1.91
ATXN3-234ENST00000555958 CT45A10P0DMU9 189 aa3.1□□□□□ -1.91
ATXN3-234ENST00000555958 CPMP14384 443 aa3.1□□□□□ -1.91
ATXN3-234ENST00000555958 SLC25A16P16260 332 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms