RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	IFNW1	P05000	195 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	CD82	P27701	267 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	PSMD4	P55036	377 aa	Known RBP	2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	CLDN18	P56856	261 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	LINC00315	P59091	139 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	LCN2	P80188	198 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	GPR176	Q14439	515 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	ZNF266	Q14584	549 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	TRMT5	Q32P41	509 aa	Known RBP	2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	H3F3C	Q6NXT2	135 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	FAM71A	Q8IYT1	594 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	FBXO36	Q8NEA4	188 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	NEURL3	Q96EH8	262 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	OPALIN	Q96PE5	141 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	FOXC2	Q99958	501 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	KCNS3	Q9BQ31	491 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	TMEM175	Q9BSA9	504 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	CHID1	Q9BWS9	393 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	WFDC1	Q9HC57	220 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	ZNF355P	Q9NSJ1	428 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	CLN6	Q9NWW5	311 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	DDX19B	Q9UMR2	479 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	PIKFYVE	Q9Y2I7	2098 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	GCM2	O75603	506 aa	Predicted RBP	2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	PSMC3	P17980	439 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	TNFSF9	P41273	254 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	CDKN2D	P55273	166 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	RPS15A	P62244	130 aa	Known RBP	2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	TNNC1	P63316	161 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	LOXL1	Q08397	574 aa	Predicted RBP	2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	GABRA6	Q16445	453 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	FAM78A	Q5JUQ0	283 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	FAM71E1	Q6IPT2	247 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	NANOGP8	Q6NSW7	305 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	WDR86	Q86TI4	376 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	COMTD1	Q86VU5	262 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	CBR4	Q8N4T8	237 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	COX18	Q8N8Q8	333 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	INO80E	Q8NBZ0	244 aa	Predicted RBP	2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	OR13C9	Q8NGT0	318 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	RBMXL1	Q96E39	390 aa	Known RBP	2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	NRBF2	Q96F24	287 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	RNF145	Q96MT1	663 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	CSPG4P5	Q96PW8	444 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	LZTS2	Q9BRK4	669 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	LLPH	Q9BRT6	129 aa	Known RBP	2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	ZC4H2	Q9NQZ6	224 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	CHMP5	Q9NZZ3	219 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	ZNRD1	Q9P1U0	126 aa		2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	TSSC4	Q9Y5U2	329 aa	Predicted RBP	2.79	□□□□□ -1.96
KTN1-223	ENST00000555573	ADAMTS13	Q76LX8	1427 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	TET2	Q6N021	2002 aa	Predicted RBP	2.78	□□□□□ -1.96
KTN1-223	ENST00000555573		A0A1W2PRD5	423 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	TSPAN11	A1L157	253 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	ZNF705G	A8MUZ8	300 aa	Predicted RBP	2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	OXT	P01178	125 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	CTSL	P07711	333 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	HOXB8	P17481	243 aa	Predicted RBP	2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	RAB4A	P20338	218 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	CCNO	P22674	350 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	RPS23	P62266	143 aa	Known RBP	2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	CHRFAM7A	Q494W8	412 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	SMUG1	Q53HV7	270 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573		Q5W150	140 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	PDPK2P	Q6A1A2	396 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	ERICH5	Q6P6B1	374 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	NDUFAF7	Q7L592	441 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	FAM9C	Q8IZT9	166 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	SNX31	Q8N9S9	440 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	OR2L8	Q8NGY9	312 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	OR8U1	Q8NH10	309 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	SUN5	Q8TC36	379 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	NAT6	Q93015	286 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	CAMK2N2	Q96S95	79 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	TM6SF2	Q9BZW4	377 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	PIGU	Q9H490	435 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	MRM3	Q9HC36	420 aa	Known RBP	2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	NECAP2	Q9NVZ3	263 aa		2.78	□□□□□ -1.96
KTN1-223	ENST00000555573	DENND4A	Q7Z401	1863 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	RAB19	A4D1S5	217 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	IQCF5	A8MTL0	148 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	GABRP	O00591	440 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	NME4	O00746	187 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	RAD51B	O15315	384 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	B4GALT5	O43286	388 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	YEATS4	O95619	227 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	ADRA2A	P08913	450 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	MRPL3	P09001	348 aa	Known RBP	2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	CCL2	P13500	99 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	PMCH	P20382	165 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	DTYMK	P23919	212 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	IL32	P24001	234 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	GABRR2	P28476	465 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	RFC3	P40938	356 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	RAB7A	P51149	207 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	EIF4EBP1	Q13541	118 aa	Predicted RBP	2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	DGCR6	Q14129	220 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	C16orf72	Q14CZ0	275 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	ANGPT1	Q15389	498 aa		2.77	□□□□□ -1.97
KTN1-223	ENST00000555573	TSC22D1	Q15714	1073 aa		2.77	□□□□□ -1.97

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