RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CHRFAM7AQ494W8 412 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 PLET1Q6UQ28 207 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 CLEC2AQ6UVW9 174 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 MBOAT2Q6ZWT7 520 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 MRPL55Q7Z7F7 128 aaKnown RBP3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 KATNAL2Q8IYT4 538 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 ZFP41Q8N8Y5 198 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 CHST4Q8NCG5 386 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 APH1BQ8WW43 257 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 NDFIP1Q9BT67 221 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 SYNDIG1Q9H7V2 258 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 UBE2ZQ9H832 354 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 DUX4Q9UBX2 424 aa3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 ARHGEF28Q8N1W1 1705 aaKnown RBP3.35□□□□□ -1.87
CKS1BP1-201ENST00000555221 COL22A1Q8NFW1 1626 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 QRICH2Q9H0J4 1663 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 OR6C74A6NCV1 312 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 A6NDN8 102 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 M0R3G1 203 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 RDH16O75452 317 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 FLOT1O75955 427 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 LSM8O95777 96 aaKnown RBP3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 HLA-HP01893 362 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 HBE1P02100 147 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 ERGP11308 486 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 ZNF32P17041 273 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 PSMC3P17980 439 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 ATF6P18850 670 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 RAB3AP20336 220 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 U2AF2P26368 475 aaKnown RBP eCLIP3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 MAGEA1P43355 309 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 HCAR3P49019 387 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 P2RX1P51575 399 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 PPP1CBP62140 327 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 CDH17Q12864 832 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 SLAQ13239 276 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 ILKQ13418 452 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 EBI3Q14213 229 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 NCF4Q15080 339 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 ORMDL2Q53FV1 153 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 TPTE2P1Q5T6R2 138 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 ZNF691Q5VV52 312 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 FAM71E1Q6IPT2 247 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 ABHD12BQ7Z5M8 362 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 METTL13Q8N6R0 699 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 OR10G2Q8NGC3 310 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 OR52E2Q8NGJ4 325 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 AGR3Q8TD06 166 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 PDXPQ96GD0 296 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 JSRP1Q96MG2 331 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 PATZ1Q9HBE1 687 aaKnown RBP3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 PRO0461Q9UI25 63 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 ZNF222Q9UK12 451 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 WDR19Q8NEZ3 1342 aa3.34□□□□□ -1.87
CKS1BP1-201ENST00000555221 EP400Q96L91 3159 aa3.34□□□□□ -1.88
CKS1BP1-201ENST00000555221 TET2Q6N021 2002 aaPredicted RBP3.34□□□□□ -1.88
CKS1BP1-201ENST00000555221 COL14A1Q05707 1796 aaKnown RBP3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 GOLGA8TH3BQL2 631 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 K7EMT4 169 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 CASC3O15234 703 aaKnown RBP3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 CTDNEP1O95476 244 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 CD160O95971 181 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 CD3GP09693 182 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 IGFBP3P17936 291 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 TCN2P20062 427 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 SEMG2Q02383 582 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 ITIH4Q14624 930 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 FAM83EQ2M2I3 478 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 CEMP1Q6PRD7 247 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 ANGPTL8Q6UXH0 198 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 OTUD6AQ7L8S5 288 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 CBR4Q8N4T8 237 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 NPWQ8N729 165 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 OR2L8Q8NGY9 312 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 SLC7A5P2Q9GIP4 190 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 SPNS1Q9H2V7 528 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 TMEM38AQ9H6F2 299 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 PDP1Q9P0J1 537 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 ZNRD1Q9P1U0 126 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 CD163L1Q9NR16 1453 aa3.33□□□□□ -1.88
CKS1BP1-201ENST00000555221 PCNTO95613 3336 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 TRAV25A0A0B4J276 109 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 SUPT3HB4E1H0 165 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 TEX46H3BTG2 121 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 B4GALT5O43286 388 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 EIF4EP06730 217 aaKnown RBP3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 CLTAP09496 248 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 SSTR5P35346 364 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 ESRRGP62508 458 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 EIF4EBP2Q13542 120 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 NANOGP8Q6NSW7 305 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 OR6Q1Q8NGQ2 317 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 UBALD1Q8TB05 177 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 OR51E1Q8TCB6 317 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 LRRC29Q8WV35 223 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 DCPSQ96C86 337 aaKnown RBP3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 CAMK2N2Q96S95 79 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 CLSTN2Q9H4D0 955 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 BEX1Q9HBH7 125 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 MRM3Q9HC36 420 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms