RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 HOPXQ9BPY8 73 aaPredicted RBP12.85□□□□□ -0.35
NEDD1-207ENST00000555114 RBM4BQ9BQ04 359 aaKnown RBP12.85□□□□□ -0.35
NEDD1-207ENST00000555114 ADAT1Q9BUB4 502 aaKnown RBP12.85□□□□□ -0.35
NEDD1-207ENST00000555114 DPAGT1Q9H3H5 408 aa12.85□□□□□ -0.35
NEDD1-207ENST00000555114 SRA1Q9HD15 236 aaKnown RBP12.85□□□□□ -0.35
NEDD1-207ENST00000555114 IGLV1-36A0A0B4J1U3 117 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 IGHV1-69DA0A0B4J2H0 117 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.84□□□□□ -0.35
NEDD1-207ENST00000555114 OOEPA6NGQ2 149 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 GGT3PA6NGU5 568 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 C3orf80F5H4A9 247 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 PPP1R3DO95685 299 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 ECDO95905 644 aaPredicted RBP12.84□□□□□ -0.35
NEDD1-207ENST00000555114 IGHV1-69P01742 117 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 MMP9P14780 707 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 CA6P23280 308 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 NOS3P29474 1203 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 MPPED2Q15777 294 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 TAF9Q16594 264 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 SFRP4Q6FHJ7 346 aaPredicted RBP12.84□□□□□ -0.35
NEDD1-207ENST00000555114 SLC18B1Q6NT16 456 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 GDPGP1Q6ZNW5 385 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 CFAP77Q6ZQR2 320 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 LINC00346Q8IVM7 164 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 SLC26A10Q8NG04 563 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 LHX4Q969G2 390 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 TBX15Q96SF7 602 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 PKP2Q99959 881 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 VIPAS39Q9H9C1 493 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 CTSZQ9UBR2 303 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 KCNG2Q9UJ96 466 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 CAB39Q9Y376 341 aaPredicted RBP12.84□□□□□ -0.35
NEDD1-207ENST00000555114 TGP01266 2768 aa12.84□□□□□ -0.35
NEDD1-207ENST00000555114 BTBD17A6NE02 478 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 CD300LBA8K4G0 201 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 M0R135 149 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 DCTN6O00399 190 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 GPR137BO60478 399 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 CLPXO76031 633 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 ZNF823P16415 610 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 SLC7A2P52569 658 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 PRSS12P56730 875 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 SMIM11AP58511 58 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 RSPO1Q2MKA7 263 aaPredicted RBP12.83□□□□□ -0.36
NEDD1-207ENST00000555114 TSEN54Q7Z6J9 526 aaKnown RBP12.83□□□□□ -0.36
NEDD1-207ENST00000555114 LDLRAD3Q86YD5 345 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 OR6V1Q8N148 313 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 OR4C15Q8NGM1 316 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 ZNF799Q96GE5 643 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 NMNAT3Q96T66 252 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 KCTD14Q9BQ13 255 aaPredicted RBP12.83□□□□□ -0.36
NEDD1-207ENST00000555114 TCF7L1Q9HCS4 588 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 RPRD1BQ9NQG5 326 aaKnown RBP12.83□□□□□ -0.36
NEDD1-207ENST00000555114 FGFR1OP2Q9NVK5 253 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 ARGLU1Q9NWB6 273 aaPredicted RBP12.83□□□□□ -0.36
NEDD1-207ENST00000555114 MRPL15Q9P015 296 aaKnown RBP12.83□□□□□ -0.36
NEDD1-207ENST00000555114 CYB5R1Q9UHQ9 305 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 FAM96BQ9Y3D0 163 aa12.83□□□□□ -0.36
NEDD1-207ENST00000555114 hCG_1807616A0A1W2PRN6 198 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 SLC22A31A6NKX4 558 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 A6NLC8 198 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 ARPC3O15145 178 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 GMNNO75496 209 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 PTBP3O95758 552 aaKnown RBP12.82□□□□□ -0.36
NEDD1-207ENST00000555114 GSK3BP49841 420 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 FXYD6P3P58550 94 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 SF3A3Q12874 501 aaKnown RBP eCLIP12.82□□□□□ -0.36
NEDD1-207ENST00000555114 RFX4Q33E94 735 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 ASPHD2Q6ICH7 369 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 RHOUQ7L0Q8 258 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 LINC01006Q8NI28 216 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 IFT27Q9BW83 186 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 NSRP1Q9H0G5 558 aaKnown RBP12.82□□□□□ -0.36
NEDD1-207ENST00000555114 SIRPDQ9H106 197 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 OPA3Q9H6K4 179 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 C14orf119Q9NWQ9 140 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 C1orf123Q9NWV4 160 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 NDUFAF4Q9P032 175 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 ARMCX1Q9P291 453 aa12.82□□□□□ -0.36
NEDD1-207ENST00000555114 GMPR2Q9P2T1 348 aaKnown RBP12.82□□□□□ -0.36
NEDD1-207ENST00000555114 SAMD4AQ9UPU9 718 aaKnown RBP12.82□□□□□ -0.36
NEDD1-207ENST00000555114 TRBV4-1A0A0J9YWV2 114 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 A0A1B0GVI7 797 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 NME4O00746 187 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 IGHV4-59P01825 116 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 GRK5P34947 590 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 IFNGR2P38484 337 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 IER3P46695 156 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 ARF6P62330 175 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 C2orf68Q2NKX9 166 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 DHRS7BQ6IAN0 325 aaPredicted RBP12.81□□□□□ -0.36
NEDD1-207ENST00000555114 BTN2A1Q7KYR7 527 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 ZBTB46Q86UZ6 589 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 OR4K13Q8NH42 304 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 OR52J3Q8NH60 311 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 OR52D1Q9H346 318 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 CNTD2Q9H8S5 307 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 EFCAB1Q9HAE3 211 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 SMURF1Q9HCE7 757 aa12.81□□□□□ -0.36
NEDD1-207ENST00000555114 PNRC2Q9NPJ4 139 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms