RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 RPL14P50914 215 aaKnown RBP3.89□□□□□ -1.79
VRK1-203ENST00000555067 FCHO2Q0JRZ9 810 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 AQP6Q13520 282 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 RUNX3Q13761 415 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 FLOT2Q14254 428 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 FZD2Q14332 565 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 GUSBP1Q15486 140 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 NRF1Q16656 503 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 BSXQ3C1V8 233 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 CCDC14Q49A88 953 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 SAPCD1Q5SSQ6 148 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 FAM182AQ5T1J6 154 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 Q6ZT83 130 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 TMEM179Q6ZVK1 233 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 SSX7Q7RTT5 188 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 MRPL55Q7Z7F7 128 aaKnown RBP3.89□□□□□ -1.79
VRK1-203ENST00000555067 HIPK1Q86Z02 1210 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 NAXDQ8IW45 347 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 FAM71AQ8IYT1 594 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 LRRC34Q8IZ02 419 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 CA13Q8N1Q1 262 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 OR51S1Q8NGJ8 323 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 SFXN5Q8TD22 340 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 TMEM230Q96A57 120 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 WDR34Q96EX3 536 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 KIR2DL4Q99706 377 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 SH3GL3Q99963 347 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 HEXA-AS1Q9H8Q6 139 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 CLCF1Q9UBD9 225 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 ZNF107Q9UII5 783 aaPredicted RBP3.89□□□□□ -1.79
VRK1-203ENST00000555067 FBXL3Q9UKT7 428 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 VSIG4Q9Y279 399 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 ACOT9Q9Y305 439 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 SNX24Q9Y343 169 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 OR51B2Q9Y5P1 312 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 PLB1Q6P1J6 1458 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 CFAP65Q6ZU64 1925 aaKnown RBP3.89□□□□□ -1.79
VRK1-203ENST00000555067 IGLV1-36A0A0B4J1U3 117 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 IGHV7-81A0A0B4J1V7 117 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 TMEM210A6NLX4 147 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 TRAPPC3O43617 180 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 C6orf47O95873 294 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 EIF4EP06730 217 aaKnown RBP3.88□□□□□ -1.79
VRK1-203ENST00000555067 LOXP28300 417 aaPredicted RBP3.88□□□□□ -1.79
VRK1-203ENST00000555067 COILP38432 576 aaPredicted RBP3.88□□□□□ -1.79
VRK1-203ENST00000555067 RGS6P49758 472 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 BASP1P80723 227 aaKnown RBP3.88□□□□□ -1.79
VRK1-203ENST00000555067 PRKCDQ05655 676 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 CD47Q08722 323 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 STX4Q12846 297 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 RAB31Q13636 194 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 ZNF266Q14584 549 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 GPNMBQ14956 572 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 PRR4Q16378 134 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 ZSCAN26Q16670 478 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 RBM48Q5RL73 367 aaKnown RBP3.88□□□□□ -1.79
VRK1-203ENST00000555067 TIMM23BQ5SRD1 257 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 THEM4Q5T1C6 240 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 ZNF658Q5TYW1 1059 aaPredicted RBP3.88□□□□□ -1.79
VRK1-203ENST00000555067 LCN12Q6JVE5 192 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 Q6ZVH6 145 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 DAW1Q8N136 415 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 CADM2Q8N3J6 435 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 ATPAF2Q8N5M1 289 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 TMEM156Q8N614 296 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 TMEM252Q8N6L7 170 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 OR51G1Q8NGK1 321 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 TMEM234Q8WY98 164 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 PPP1R14BQ96C90 147 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 SGTBQ96EQ0 304 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 PSMB7Q99436 277 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 ING2Q9H160 280 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 SRMSQ9H3Y6 488 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 ACOT13Q9NPJ3 140 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 ASCL3Q9NQ33 180 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 UBIAD1Q9Y5Z9 338 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 STYXL1Q9Y6J8 313 aa3.88□□□□□ -1.79
VRK1-203ENST00000555067 RALGAPA1Q6GYQ0 2036 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 A0A0B4J2A0 478 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 SHISA9B4DS77 424 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 SHOX2O60902 331 aaPredicted RBP3.87□□□□□ -1.79
VRK1-203ENST00000555067 TBL1XO60907 577 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 IGHV3-48P01763 117 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 KRT7P08729 469 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 HSPD1P10809 573 aaKnown RBP3.87□□□□□ -1.79
VRK1-203ENST00000555067 CD37P11049 281 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 FOLR2P14207 255 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 ATF6P18850 670 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 HRH1P35367 487 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 MAGEA2P43356 314 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 GALR1P47211 349 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 OR10A3P58181 314 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 DSTNP60981 165 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 RPS21P63220 83 aaKnown RBP3.87□□□□□ -1.79
VRK1-203ENST00000555067 CXCL6P80162 114 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 RESP18Q5W5W9 173 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 RAB43Q86YS6 212 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 PNKDQ8N490 385 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 CBR4Q8N4T8 237 aa3.87□□□□□ -1.79
VRK1-203ENST00000555067 NKAPP1Q8N9T2 125 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms