RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 H3BUI4 141 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 KIR2DL3P43628 341 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 ZNF84P51523 738 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 EFNB2P52799 333 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 NHLH1Q02575 133 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 SCN1BQ07699 218 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 TNK1Q13470 666 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 MADCAM1Q13477 382 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 SGCAQ16586 387 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 CLVS2Q5SYC1 327 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 PXDC1Q5TGL8 231 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 HACD4Q5VWC8 232 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 OR5AS1Q8N127 324 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 SLC22A24Q8N4F4 322 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 RBM24Q9BX46 236 aaKnown RBP7.79□□□□□ -1.16
TDP1-210ENST00000554976 WNT5BQ9H1J7 359 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 SLC7A10Q9NS82 523 aa7.79□□□□□ -1.16
TDP1-210ENST00000554976 ZNF503-AS2A6NEH8 195 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 WIPF3A6NGB9 483 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 SS18L1O75177 396 aaPredicted RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 TGM6O95932 706 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 RNF144BQ7Z419 303 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 SKA3Q8IX90 412 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 LRRC18Q8N456 261 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 FNDC9Q8TBE3 224 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 OR51E1Q8TCB6 317 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 SMIM4Q8WVI0 70 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 C1orf147Q96MC9 270 aaPredicted RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 FOXB1Q99853 325 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 SLITRK2Q9H156 845 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 SLCO5A1Q9H2Y9 848 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 KCNK15Q9H427 330 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 IFT22Q9H7X7 185 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 DCAF16Q9NXF7 216 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 TRGV5A0A0B4J1U4 118 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 TMEM272A0A1B0GTI8 110 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 PDGFAP04085 211 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 GABRA1P14867 456 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 HSD11B1P28845 292 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 FOXG1P55316 489 aaPredicted RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 SRYQ05066 204 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 KLF9Q13886 244 aaPredicted RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 RNPS1Q15287 305 aaKnown RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 CEACAM16Q2WEN9 425 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 DEFB109BQ30KR1 87 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 KLHL24Q6TFL4 600 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 FIP1L1Q6UN15 594 aaKnown RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 KRT74Q7RTS7 529 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 NUFIP2Q7Z417 695 aaKnown RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 FGD2Q7Z6J4 655 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 ZNF433Q8N7K0 673 aaPredicted RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 SYNPRQ8TBG9 265 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 RAB40AQ8WXH6 277 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 TMEM246Q9BRR3 403 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 THAP7Q9BT49 309 aaPredicted RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 OR2H1Q9GZK4 316 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 DEFB127Q9H1M4 99 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 GP6Q9HCN6 339 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 B3GNT2Q9NY97 397 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 SLC5A6Q9Y289 635 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 ATP6V1G2-DDX39BF2Z307 99 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 AQP7O14520 342 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 CTAG2O75638 210 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 CCNKO75909 580 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 B4GALT1P15291 398 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 AGTR1P30556 359 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 DEFA1P59665 94 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 DEFA3P59666 94 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 DGCR2P98153 550 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 PSG4Q00888 419 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 SNAI3Q3KNW1 292 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 ANKRD16Q6P6B7 361 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 CDH26Q8IXH8 852 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 NKAIN3Q8N8D7 197 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 FGGYQ96C11 551 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 ZNF75AQ96N20 296 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 HDHD2Q9H0R4 259 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 METTL17Q9H7H0 456 aaPredicted RBP7.78□□□□□ -1.16
TDP1-210ENST00000554976 FBLN5Q9UBX5 448 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 ZNF175Q9Y473 711 aa7.78□□□□□ -1.16
TDP1-210ENST00000554976 IGKV1-9A0A0C4DH69 117 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 ANXA2P2A6NMY6 339 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 ACOT7O00154 380 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 ANXA2P07355 339 aaKnown RBP7.77□□□□□ -1.17
TDP1-210ENST00000554976 YES1P07947 543 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 DBHP09172 617 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 SLC2A1P11166 492 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 BTF3P20290 206 aaKnown RBP7.77□□□□□ -1.17
TDP1-210ENST00000554976 MRPS15P82914 257 aaKnown RBP7.77□□□□□ -1.17
TDP1-210ENST00000554976 TAB1Q15750 504 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 PLA1AQ53H76 456 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 ZNF600Q6ZNG1 722 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 COLCA1Q6ZS62 124 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 DOK3Q7L591 496 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 SERPINA12Q8IW75 414 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 PAQR4Q8N4S7 273 aaPredicted RBP7.77□□□□□ -1.17
TDP1-210ENST00000554976 OR1M1Q8NGA1 313 aa7.77□□□□□ -1.17
TDP1-210ENST00000554976 OR4D6Q8NGJ1 314 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms