RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TBX1O43435 398 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 HLA-DPB1P04440 258 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 ERCC1P07992 297 aaPredicted RBP10.47□□□□□ -0.73
SYNE2-214ENST00000554928 ADH4P08319 380 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 GABRB1P18505 474 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 TUBG1P23258 451 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 GIFP27352 417 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 HSD11B1P28845 292 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 RAD23AP54725 363 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 GRB2P62993 217 aaKnown RBP10.47□□□□□ -0.73
SYNE2-214ENST00000554928 ELF3P78545 371 aaPredicted RBP10.47□□□□□ -0.73
SYNE2-214ENST00000554928 LOXL1Q08397 574 aaPredicted RBP10.47□□□□□ -0.73
SYNE2-214ENST00000554928 MOGQ16653 247 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 PCGF3Q3KNV8 242 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 AVPI1Q5T686 147 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 PLEKHG7Q6ZR37 379 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 SLC35F2Q8IXU6 374 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 OR8G5Q8NG78 346 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 OR5L1Q8NGL2 311 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 OR8J1Q8NGP2 316 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 ITLN1Q8WWA0 313 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 SGK3Q96BR1 496 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 ELMOD3Q96FG2 381 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 TBX5Q99593 518 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 APOL4Q9BPW4 351 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 REPIN1Q9BWE0 567 aaKnown RBP10.47□□□□□ -0.73
SYNE2-214ENST00000554928 YIPF3Q9GZM5 350 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 NARFLQ9H6Q4 476 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 SAP30LQ9HAJ7 183 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 MYOZ1Q9NP98 299 aaPredicted RBP10.47□□□□□ -0.73
SYNE2-214ENST00000554928 TUBG2Q9NRH3 451 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 NKX1-2Q9UD57 310 aaPredicted RBP10.47□□□□□ -0.73
SYNE2-214ENST00000554928 LAMP5Q9UJQ1 280 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 IGHV1-69-2A0A0G2JMI3 117 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 SLC22A31A6NKX4 558 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 CD300LBA8K4G0 201 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 NDUFS8O00217 210 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 TPD52L2O43399 206 aaKnown RBP10.46□□□□□ -0.73
SYNE2-214ENST00000554928 CLIC3O95833 236 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 CD55P08174 381 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 SBK2P0C263 348 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 ACHEP22303 614 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 USF1P22415 310 aaPredicted RBP10.46□□□□□ -0.73
SYNE2-214ENST00000554928 HTR1FP30939 366 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 CRYBB2P43320 205 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 CDC42P60953 191 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 TNFAIP6P98066 277 aaPredicted RBP10.46□□□□□ -0.73
SYNE2-214ENST00000554928 HOXA4Q00056 320 aaPredicted RBP10.46□□□□□ -0.73
SYNE2-214ENST00000554928 MFGE8Q08431 387 aaPredicted RBP10.46□□□□□ -0.73
SYNE2-214ENST00000554928 TMEM249Q2WGJ8 235 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 GFOD2Q3B7J2 385 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 FAM209AQ5JX71 171 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 PGAP1Q75T13 922 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 MRPL21Q7Z2W9 205 aaKnown RBP10.46□□□□□ -0.73
SYNE2-214ENST00000554928 KRT77Q7Z794 578 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 GID4Q8IVV7 300 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 ENTHD1Q8IYW4 607 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 OR56B2PQ8NGI1 322 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 SPSB4Q96A44 273 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 LYZL4Q96KX0 146 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 COG8Q96MW5 612 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 OR8B4Q96RC9 309 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 SLC30A2Q9BRI3 323 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 CYSLTR2Q9NS75 346 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 DECR2Q9NUI1 292 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 FAM118AQ9NWS6 357 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 HAO2Q9NYQ3 351 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 H2AFY2Q9P0M6 372 aaPredicted RBP10.46□□□□□ -0.73
SYNE2-214ENST00000554928 ORC6Q9Y5N6 252 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 GMPPBQ9Y5P6 360 aa10.46□□□□□ -0.73
SYNE2-214ENST00000554928 LOC100130705A0A1B0GUX0 176 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 F5H5P2 479 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 PPIHO43447 177 aaKnown RBP10.45□□□□□ -0.74
SYNE2-214ENST00000554928 PNPP00491 289 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 MT-ND5P03915 603 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 HEXAP06865 529 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 IGHV4-31P0DP07 118 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 PMELP40967 661 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 SLC15A1P46059 708 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 PSMA6P60900 246 aaKnown RBP10.45□□□□□ -0.74
SYNE2-214ENST00000554928 CXCR4P61073 352 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 SNRPGP62308 76 aaKnown RBP10.45□□□□□ -0.74
SYNE2-214ENST00000554928 FAM3AP98173 230 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 MALLQ13021 153 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF771Q7L3S4 317 aaPredicted RBP10.45□□□□□ -0.74
SYNE2-214ENST00000554928 OR8B12Q8NGG6 310 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 APH1BQ8WW43 257 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 REEP6Q96HR9 211 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 PGAM5Q96HS1 289 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 OR2V2Q96R30 315 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 CHODLQ9H9P2 273 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 FAM206AQ9NX38 181 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 IMPAD1Q9NX62 359 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 WARS2Q9UGM6 360 aaKnown RBP10.45□□□□□ -0.74
SYNE2-214ENST00000554928 MRM2Q9UI43 246 aaKnown RBP10.45□□□□□ -0.74
SYNE2-214ENST00000554928 ZDHHC8Q9ULC8 765 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 TLN2Q9Y4G6 2542 aa10.45□□□□□ -0.74
SYNE2-214ENST00000554928 FN1P02751 2386 aaKnown RBP10.44□□□□□ -0.74
SYNE2-214ENST00000554928 hCG_38984A0A1B0GV85 526 aa10.44□□□□□ -0.74
SYNE2-214ENST00000554928 A0A1B0GWJ7 208 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms