RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TCEAL5Q5H9L2 206 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF684Q5T5D7 378 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 SNX20Q7Z614 316 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 VTCN1Q7Z7D3 282 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 LINC00523Q86TU6 105 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 CSGALNACT2Q8N6G5 542 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF645Q8N7E2 425 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 TMEM104Q8NE00 496 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 FBXO36Q8NEA4 188 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 OR4K5Q8NGD3 323 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 OR10W1Q8NGF6 305 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 OR51L1Q8NGJ5 315 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 OR6N1Q8NGY5 312 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 OR52P1PQ8NH57 321 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 COQ8AQ8NI60 647 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 ITFG1Q8TB96 612 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 C15orf40Q8WUR7 153 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 TCEAL3Q969E4 200 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 TOP1MTQ969P6 601 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 PTX4Q96A99 478 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 FLYWCH2Q96CP2 140 aaKnown RBP1.9□□□□□ -2.11
SCFD1-213ENST00000554776 STARD4Q96DR4 205 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF382Q96SR6 550 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 CALN1Q9BXU9 219 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 FGF23Q9GZV9 251 aaPredicted RBP1.9□□□□□ -2.11
SCFD1-213ENST00000554776 PARP12Q9H0J9 701 aaKnown RBP1.9□□□□□ -2.11
SCFD1-213ENST00000554776 OR52D1Q9H346 318 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF430Q9H8G1 570 aaPredicted RBP1.9□□□□□ -2.11
SCFD1-213ENST00000554776 FANCEQ9HB96 536 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 HMG20AQ9NP66 347 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 RGS18Q9NS28 235 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 ADA2Q9NZK5 511 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 RAB26Q9ULW5 256 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 CHTOPQ9Y3Y2 248 aaKnown RBP1.9□□□□□ -2.11
SCFD1-213ENST00000554776 ARID1AO14497 2285 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 TNS2Q63HR2 1409 aa1.9□□□□□ -2.11
SCFD1-213ENST00000554776 NUP214P35658 2090 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-213ENST00000554776 IGLV1-50A0A075B6I6 118 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 IGKV2D-24A0A075B6R9 120 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 A0A1W2PPV4 95 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 A6NDN8 102 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 SLC22A20A6NK97 555 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF701M0R085 212 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-213ENST00000554776 DNASE2O00115 360 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-213ENST00000554776 SLC16A7O60669 478 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 MED6O75586 246 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 REM1O75628 298 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 SEMA3DO95025 777 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 APCSP02743 223 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 RHOXF2BP0C7M4 288 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 OR56A5P0C7T3 313 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 STAG3L2P0CL84 134 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 RAB5AP20339 215 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 CD70P32970 193 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 PFN2P35080 140 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 POLR2IP36954 125 aaKnown RBP1.89□□□□□ -2.11
SCFD1-213ENST00000554776 MYCNOSP40205 109 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 SYNJ2BPP57105 145 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 CARD18P57730 90 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 CDK5Q00535 292 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 LOXL1Q08397 574 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-213ENST00000554776 TFDP2Q14188 446 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 EBI3Q14213 229 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 KIR2DS1Q14954 304 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 IRF4Q15306 451 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 CHRFAM7AQ494W8 412 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 C6orf183Q5T699 404 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 H3F3CQ6NXT2 135 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 IGFL3Q6UXB1 125 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 WDR82Q6UXN9 313 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 LINC00336Q6ZUF6 198 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 CALHM1Q8IU99 346 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 SAXO1Q8IYX7 474 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 BAALCQ8WXS3 180 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 TFGQ92734 400 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-213ENST00000554776 GHSRQ92847 366 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 DCPSQ96C86 337 aaKnown RBP1.89□□□□□ -2.11
SCFD1-213ENST00000554776 TMEM243Q9BU79 118 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 CHID1Q9BWS9 393 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 IL22Q9GZX6 179 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 CHRNA10Q9GZZ6 450 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 CD209Q9NNX6 404 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 RRAGDQ9NQL2 400 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-213ENST00000554776 ZNRD1Q9P1U0 126 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 HYOU1Q9Y4L1 999 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 YTHDF2Q9Y5A9 579 aaKnown RBP1.89□□□□□ -2.11
SCFD1-213ENST00000554776 FHOD3Q2V2M9 1422 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 ADAMTS13Q76LX8 1427 aa1.89□□□□□ -2.11
SCFD1-213ENST00000554776 TSPOAP1O95153 1857 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 IGKV1-27A0A075B6S5 117 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 A0A0U1RQV1 116 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 KRBOX1C9JBD0 128 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 TRDMT1O14717 391 aaKnown RBP1.88□□□□□ -2.11
SCFD1-213ENST00000554776 MAGEB4O15481 346 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-213ENST00000554776 SERPINB7O75635 380 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 OTCP00480 354 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 CSTAP01040 98 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 CRYGCP07315 174 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 PRKACAP17612 351 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 LOXP28300 417 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms