RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 COMMD3-BMI1R4GMX3 469 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 IGKV1D-43A0A0B4J1Z2 117 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 FAM183AA6NL82 134 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 C17orf100A8MU93 164 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 H3BSA7 217 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 PPIHO43447 177 aaKnown RBP9□□□□□ -0.97
SHMT2-215ENST00000554656 INMTO95050 263 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 PTHP01270 115 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 F13BP05160 661 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 LCKP06239 509 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 MMP7P09237 267 aaPredicted RBP9□□□□□ -0.97
SHMT2-215ENST00000554656 SBK2P0C263 348 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 NR2C1P13056 603 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 SPI1P17947 270 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 PSMB9P28065 219 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 ATP6V1E1P36543 226 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 CDKN2AP42771 156 aaKnown RBP9□□□□□ -0.97
SHMT2-215ENST00000554656 WNT4P56705 351 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 TMEM33P57088 247 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 RPS7P62081 194 aaKnown RBP9□□□□□ -0.97
SHMT2-215ENST00000554656 CCL8P80075 99 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 ACSM1Q08AH1 577 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 HNRNPA0Q13151 305 aaKnown RBP9□□□□□ -0.97
SHMT2-215ENST00000554656 TIGD6Q17RP2 521 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 KLHL12Q53G59 568 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 MESTQ5EB52 335 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 RGS7BPQ6MZT1 257 aaPredicted RBP9□□□□□ -0.97
SHMT2-215ENST00000554656 LEG1Q6P5S2 330 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 ACBD7Q8N6N7 88 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 CYB561A3Q8NBI2 242 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 NOXO1Q8NFA2 376 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 ASB10Q8WXI3 467 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 MCHR2Q969V1 340 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 ISOC1Q96CN7 298 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 NMD3Q96D46 503 aaKnown RBP9□□□□□ -0.97
SHMT2-215ENST00000554656 YIPF6Q96EC8 236 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 ALG12Q9BV10 488 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 OR51V1Q9H2C8 321 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 MED20Q9H944 212 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 G6PC2Q9NQR9 355 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 VSX1Q9NZR4 365 aaPredicted RBP9□□□□□ -0.97
SHMT2-215ENST00000554656 METRNQ9UJH8 293 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 UGT2A1Q9Y4X1 527 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 CACNG2Q9Y698 323 aa9□□□□□ -0.97
SHMT2-215ENST00000554656 PRSS37A4D1T9 235 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 OR6C68A6NDL8 312 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 CCDC160A6NGH7 325 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 CDC14BO60729 498 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 RGS9O75916 674 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-215ENST00000554656 GABARAPO95166 117 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 BCL10O95999 233 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 IGHG1P01857 330 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 LIMS3P0CW19 117 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 LIMS4P0CW20 117 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 CRABP1P29762 137 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 GSTT1P30711 240 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 WNT5AP41221 380 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 ZNF133P52736 654 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-215ENST00000554656 KLF3P57682 345 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-215ENST00000554656 BDH1Q02338 343 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 HSF2Q03933 536 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 GLO1Q04760 184 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 MLLT11Q13015 90 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-215ENST00000554656 SPHARQ15513 63 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 NKPD1Q17RQ9 610 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 TIMM50Q3ZCQ8 353 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 AVPI1Q5T686 147 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 TMEM53Q6P2H8 277 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 DNM1P34Q6PK57 102 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 ZBTB46Q86UZ6 589 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 KLHL36Q8N4N3 616 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 SYT14Q8NB59 555 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 CPEB3Q8NE35 698 aaKnown RBP8.99□□□□□ -0.97
SHMT2-215ENST00000554656 OR51G2Q8NGK0 314 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 OR51F2Q8NH61 342 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 SYNPRQ8TBG9 265 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 NABP1Q96AH0 204 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 OTULINQ96BN8 352 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 NMNAT3Q96T66 252 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 CNN2Q99439 309 aaKnown RBP8.99□□□□□ -0.97
SHMT2-215ENST00000554656 MGLLQ99685 303 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 ZNF416Q9BWM5 594 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 HCAR1Q9BXC0 346 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 MARCH7Q9H992 704 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 CDH20Q9HBT6 801 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 ADGRL4Q9HBW9 690 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 ERVK13-1Q9NX77 482 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 PTTG2Q9NZH5 202 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 ENPP5Q9UJA9 477 aa8.99□□□□□ -0.97
SHMT2-215ENST00000554656 CAB39Q9Y376 341 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-215ENST00000554656 LOC105371242A0A075B767 164 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 C12orf71A8MTZ7 269 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 CCRL2O00421 344 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 FARS2O95363 451 aaKnown RBP8.98□□□□□ -0.97
SHMT2-215ENST00000554656 SCG5P05408 212 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 OR2T7P0C7T2 308 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 CFPP27918 469 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 CDAP32320 146 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 ETV1P50549 477 aa8.98□□□□□ -0.97
SHMT2-215ENST00000554656 UCP2P55851 309 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms