RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 OR51L1Q8NGJ5 315 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 OR6N1Q8NGY5 312 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 ZNF519Q8TB69 540 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 RPS4Y2Q8TD47 263 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 PPP1R14BQ96C90 147 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 PELI1Q96FA3 418 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 PGLYRP3Q96LB9 341 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 DCLRE1CQ96SD1 692 aaKnown RBP10.79□□□□□ -0.68
SHMT2-214ENST00000554604 EMC6Q9BV81 110 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 CACNG6Q9BXT2 260 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 TXNIPQ9H3M7 391 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 TPK1Q9H3S4 243 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 RERGLQ9H628 205 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 MED29Q9NX70 200 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 DAPK2Q9UIK4 370 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 FKBP7Q9Y680 259 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 ARPC4-TTLL3A0A0A6YYG9 625 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 IGHV1-18A0A0C4DH31 117 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 XKRYO14609 159 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 GPRIN2O60269 458 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 NDUFS7O75251 213 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 IGHV4-39P01824 125 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 APOBEC3AP31941 199 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-214ENST00000554604 BLVRAP53004 296 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 HCCSP53701 268 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 PPP3R1P63098 170 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 CAMK2DQ13557 499 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 RAB35Q15286 201 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 TRIM16LQ309B1 348 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 ZNF684Q5T5D7 378 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 PLEKHG7Q6ZR37 379 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 KCTD20Q7Z5Y7 419 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 TPRA1Q86W33 373 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 LYSMD2Q8IV50 215 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 TIGD4Q8IY51 512 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 RFLNBQ8N5W9 214 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 ABHD4Q8TB40 342 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 SNX33Q8WV41 574 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 SMIM19Q96E16 107 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 POM121Q96HA1 1249 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 TXNDC15Q96J42 360 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 VSX1Q9NZR4 365 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-214ENST00000554604 GDF2Q9UK05 429 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-214ENST00000554604 COPS3Q9UNS2 423 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 ABCA2Q9BZC7 2435 aa10.78□□□□□ -0.68
SHMT2-214ENST00000554604 CHD3Q12873 2000 aaKnown RBP10.77□□□□□ -0.68
SHMT2-214ENST00000554604 hCG_2014768A0A024R1R8 64 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 PRSS37A4D1T9 235 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 A6NIZ1 184 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 RNF223E7ERA6 249 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 PHYHO14832 338 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 RGS5O15539 181 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 TBX1O43435 398 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 SSX4O60224 188 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 GATBO75879 557 aaKnown RBP10.77□□□□□ -0.69
SHMT2-214ENST00000554604 IFNGR1P15260 489 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 GDI2P50395 445 aaKnown RBP10.77□□□□□ -0.69
SHMT2-214ENST00000554604 RAP1BP61224 184 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 RAP1AP62834 184 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 SLC3A1Q07837 685 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 DDI2Q5TDH0 399 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 FAM205BPQ63HN1 556 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 C11orf71Q6IPW1 123 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 MZT2AQ6P582 158 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 LAX1Q8IWV1 398 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 CCDC36Q8IYA8 594 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 C20orf196Q8IYI0 205 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 OR6V1Q8N148 313 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 ACOT12Q8WYK0 555 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 PHYHIPQ92561 330 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF837Q96EG3 531 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-214ENST00000554604 ULBP2Q9BZM5 246 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 MIXL1Q9H2W2 232 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 NELFAQ9H3P2 528 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 SP140LQ9H930 580 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 SRA1Q9HD15 236 aaKnown RBP10.77□□□□□ -0.69
SHMT2-214ENST00000554604 ABCB10Q9NRK6 738 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 TMEM14AQ9Y6G1 99 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 V9GYH0 126 aa10.77□□□□□ -0.69
SHMT2-214ENST00000554604 YLPM1P49750 1951 aaKnown RBP10.76□□□□□ -0.69
SHMT2-214ENST00000554604 A0A1W2PRG6 482 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 SHISA3A0PJX4 238 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 DCTN6O00399 190 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 MAGEB3O15480 346 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 TACSTD2P09758 323 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 CECR9P0C854 216 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 CBR1P16152 277 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 MYL9P24844 172 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 PTBP1P26599 531 aaKnown RBP eCLIP10.76□□□□□ -0.69
SHMT2-214ENST00000554604 ARR3P36575 388 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 CSNK1A1P48729 337 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 IDH3GP51553 393 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-214ENST00000554604 BIDP55957 195 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 NAAAQ02083 359 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 EGR3Q06889 387 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 C3orf36Q3SXR2 165 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 PHYHD1Q5SRE7 291 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 METAP1DQ6UB28 335 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF813Q6ZN06 617 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 SLC35D2Q76EJ3 337 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms