RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 RSPO4Q2I0M5 234 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF40-203ENST00000554514 PHF19Q5T6S3 580 aa13.91□□□□□ -0.18
ARHGEF40-203ENST00000554514 LYPD6Q86Y78 171 aa13.91□□□□□ -0.18
ARHGEF40-203ENST00000554514 CDH26Q8IXH8 852 aa13.91□□□□□ -0.18
ARHGEF40-203ENST00000554514 PDZD9Q8IXQ8 264 aa13.91□□□□□ -0.18
ARHGEF40-203ENST00000554514 NOXO1Q8NFA2 376 aa13.91□□□□□ -0.18
ARHGEF40-203ENST00000554514 OR4K17Q8NGC6 315 aa13.91□□□□□ -0.18
ARHGEF40-203ENST00000554514 OR5L2Q8NGL0 311 aa13.91□□□□□ -0.18
ARHGEF40-203ENST00000554514 OR5M8Q8NGP6 311 aa13.91□□□□□ -0.18
ARHGEF40-203ENST00000554514 DEFB126Q9BYW3 111 aa13.91□□□□□ -0.18
ARHGEF40-203ENST00000554514 KCNK7Q9Y2U2 307 aa13.91□□□□□ -0.18
ARHGEF40-203ENST00000554514 EXPH5Q8NEV8 1989 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 C13orf42A0A1B0GVH6 325 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 OR2AT4A6NND4 320 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZFAND5O76080 213 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 QDPRP09417 244 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZNF43P17038 809 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 PTGDSP41222 190 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 SUMO3P55854 103 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZMYND11Q15326 602 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 SGCAQ16586 387 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZNF283Q8N7M2 679 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 OR8B12Q8NGG6 310 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 PPP1R1CQ8WVI7 109 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 MRGPRFQ96AM1 343 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZNF75AQ96N20 296 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 PRRT1Q99946 306 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 PCED1AQ9H1Q7 454 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZMAT5Q9UDW3 170 aaKnown RBP13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 CACNA1EQ15878 2313 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 EML6Q6ZMW3 1958 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 IGHV3-15A0A0B4J1V0 119 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 OR14I1A6ND48 311 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 MTRF1O75570 445 aaKnown RBP13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 PGA4P0DJD7 388 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 PGA3P0DJD8 388 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 RPA2P15927 270 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 M6PRP20645 277 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 MPGP29372 298 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 LUMP51884 338 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 MEF2DQ14814 521 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 THEM4Q5T1C6 240 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 RAB12Q6IQ22 244 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 ESX1Q8N693 406 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 DNASE2BQ8WZ79 361 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 MRGPRX4Q96LA9 322 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 CCDC74BQ96LY2 380 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 MRPL13Q9BYD1 178 aaKnown RBP13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 WDR13Q9H1Z4 485 aa13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 MRPS28Q9Y2Q9 187 aaKnown RBP13.9□□□□□ -0.18
ARHGEF40-203ENST00000554514 A0A1B0GTI1 187 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 C5orf63A6NC05 138 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 TUBAL3A6NHL2 446 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 ZNF878C9JN71 531 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 SOCS1O15524 211 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 ERCC1P07992 297 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 RAB6AP20340 208 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 GABREP78334 506 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 CLVS2Q5SYC1 327 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 STPG2Q8N412 459 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 OR1S1Q8NH92 325 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 JSRP1Q96MG2 331 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 VRK1Q99986 396 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 ZNF471Q9BX82 626 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 PRR13Q9NZ81 148 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 GPR160Q9UJ42 338 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 FREM2Q5SZK8 3169 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 ARID1AO14497 2285 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 IGLV3-12A0A075B6K2 115 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 A0A0A6YYH2 397 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 IGHV5-10-1A0A0J9YXX1 117 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 A6NJ64 397 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 ZNF726A6NNF4 738 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 CX3CR1P49238 355 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 HDDC2Q7Z4H3 204 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 SLC51BQ86UW2 128 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 NAA40Q86UY6 237 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 FAM219AQ8IW50 185 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 OR10R2Q8NGX6 335 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 OR6S1Q8NH40 331 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 MARCH1Q8TCQ1 289 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 RASL10BQ96S79 203 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 SPSB2Q99619 263 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 OCIAD1Q9NX40 245 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 ADAMTS20P59510 1910 aa13.89□□□□□ -0.19
ARHGEF40-203ENST00000554514 SIGLEC6O43699 453 aa13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 TRAF3IP2O43734 574 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 CRTAPO75718 401 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 BPNT1O95861 308 aa13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 ATF4P18848 351 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 PI3P19957 117 aa13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 ZP3P21754 424 aa13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 PRKACBP22694 351 aa13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 DLSTP36957 453 aa13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 CLDN17P56750 224 aa13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 LYG2Q86SG7 212 aa13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 SPEM1Q8N4L4 309 aa13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 ST8SIA2Q92186 375 aa13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 A0A0A6YYD4 124 aa13.88□□□□□ -0.19
ARHGEF40-203ENST00000554514 KANTRA0A1W2PQU2 76 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms