RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 DCHS1Q96JQ0 3298 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 ACAA1P09110 424 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF806P0C7X5 589 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 EIF1P41567 113 aaKnown RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 DMRTC1Q5HYR2 192 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 KCTD18Q6PI47 426 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 NHLRC1Q6VVB1 395 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 BTN2A1Q7KYR7 527 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 PLPP7Q8NBV4 271 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 OR10H5Q8NGA6 315 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 GPR148Q8TDV2 347 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 ST7LQ8TDW4 575 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 RNF128Q8TEB7 428 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 PSMF1Q92530 271 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 SH2D2AQ9NP31 389 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 A0A0J9YW62 118 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 TMEM212A6NML5 194 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 ANXA2P07355 339 aaKnown RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 QDPRP09417 244 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 PGA4P0DJD7 388 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 PGA3P0DJD8 388 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 VEGFCP49767 419 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 DLX5P56178 289 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 DSCR4P56555 118 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 RSPO4Q2I0M5 234 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 WIPI1Q5MNZ9 446 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 TMEM164Q5U3C3 297 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 GLB1L2Q8IW92 636 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 ZBTB8AQ96BR9 441 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 KCTD12Q96CX2 325 aaKnown RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 MRPL13Q9BYD1 178 aaKnown RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 SPRY4Q9C004 299 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 C20orf85Q9H1P6 137 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 TRBV5-5A0A0J9YX44 114 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 A0A1W2PNV4 684 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 P2RY10O00398 339 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 IGHG1P01857 330 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 FABP1P07148 127 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 KCNJ3P48549 501 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 ASPHD2Q6ICH7 369 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 DNM1P34Q6PK57 102 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 RELL2Q8NC24 303 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-212ENST00000554467 NOXO1Q8NFA2 376 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 OR6S1Q8NH40 331 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 MIB2Q96AX9 1013 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 SLC25A44Q96H78 314 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-212ENST00000554467 SRXN1Q9BYN0 137 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 PARD6AQ9NPB6 346 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 SPAARA0A1B0GVQ0 90 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 TMEM269A0A1B0GVZ9 245 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF726A6NNF4 738 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 H2BFMP0C1H6 154 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 GABRA1P14867 456 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 PRKXP51817 358 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 PHYHD1Q5SRE7 291 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 CDCP2Q5VXM1 449 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF660Q6AZW8 331 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-212ENST00000554467 LRRTM1Q86UE6 522 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-212ENST00000554467 DEFB124Q8NES8 71 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 ASB17Q8WXJ9 295 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 WNT2BQ93097 391 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 MCHR2Q969V1 340 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 SLC25A38Q96DW6 304 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 LIN37Q96GY3 246 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-212ENST00000554467 CMSS1Q9BQ75 279 aaKnown RBP10.35□□□□□ -0.75
SHMT2-212ENST00000554467 ADAT1Q9BUB4 502 aaKnown RBP10.35□□□□□ -0.75
SHMT2-212ENST00000554467 FAM86C1Q9NVL1 165 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 ASH2LQ9UBL3 628 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 OR5V1Q9UGF6 321 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 MLXQ9UH92 298 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 CACNA1GO43497 2377 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 DOCK7Q96N67 2140 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 CCDC187A0A096LP49 1063 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 TRBV23-1A0A0A0MS06 115 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 AQP7P3A6NL99 342 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 H7C2Y5 167 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 PHYHO14832 338 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 ARPC1BO15143 372 aaKnown RBP10.35□□□□□ -0.75
SHMT2-212ENST00000554467 RER1O15258 196 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 CD1AP06126 327 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 ITGA3P26006 1051 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 RASGEF1BQ0VAM2 473 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 TRIP6Q15654 476 aaKnown RBP10.35□□□□□ -0.75
SHMT2-212ENST00000554467 GFOD2Q3B7J2 385 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 BPIFCQ8NFQ6 507 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 OR51A2Q8NGJ7 313 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 OR10S1Q8NGN2 331 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 OR52I2Q8NH67 350 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 C2CD4CQ8TF44 421 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 SLC25A28Q96A46 364 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 SLAMF6Q96DU3 332 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 OXGR1Q96P68 337 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 SIGLEC12Q96PQ1 595 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 DDA1Q9BW61 102 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF69Q9UC07 566 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 HDGFL3Q9Y3E1 203 aa10.35□□□□□ -0.75
SHMT2-212ENST00000554467 CYB561P49447 251 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 ROM1Q03395 351 aa10.34□□□□□ -0.75
SHMT2-212ENST00000554467 SGCAQ16586 387 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms