RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 TRAV40A0A0B4J280 105 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 CD300LBA8K4G0 201 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 TMPRSS2O15393 492 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 PYCR1P32322 319 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 NPY4RP50391 375 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 IL13RA1P78552 427 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 SLC9A3R2Q15599 337 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 SPATS1Q496A3 300 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 WDR25Q64LD2 544 aaPredicted RBP15.65■□□□□ 0.1
CPSF2-203ENST00000554290 DRAM2Q6UX65 266 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 LYPD2Q6UXB3 125 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 PLPP7Q8NBV4 271 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 OR4C15Q8NGM1 316 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 EGLN3Q9H6Z9 239 aa15.65■□□□□ 0.1
CPSF2-203ENST00000554290 GGT3PA6NGU5 568 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 POM121CA8CG34 1229 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 ENSAO43768 121 aaKnown RBP15.64■□□□□ 0.09
CPSF2-203ENST00000554290 HMGA2P52926 109 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 BPIFB3P59826 476 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 MPPED2Q15777 294 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 PRR31Q5SQ13 230 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 PRAMEF6Q5VXH4 476 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 CD276Q5ZPR3 534 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 C16orf89Q6UX73 402 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 FITM2Q8N6M3 262 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 SPERTQ8NA61 448 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 CYB561A3Q8NBI2 242 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 OR10S1Q8NGN2 331 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 ADAT1Q9BUB4 502 aaKnown RBP15.64■□□□□ 0.09
CPSF2-203ENST00000554290 MMADHCQ9H3L0 296 aaPredicted RBP15.64■□□□□ 0.09
CPSF2-203ENST00000554290 TRIM36Q9NQ86 728 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 ERVK-18Q9QC07 812 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 TAGLN3Q9UI15 199 aa15.64■□□□□ 0.09
CPSF2-203ENST00000554290 TVP23AA6NH52 213 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 TNFRSF11BO00300 401 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 BHLHE40O14503 412 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 FMO3P31513 532 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 OTX1P32242 354 aaPredicted RBP15.63■□□□□ 0.09
CPSF2-203ENST00000554290 PSMB10P40306 273 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 RPS27P42677 84 aaKnown RBP15.63■□□□□ 0.09
CPSF2-203ENST00000554290 FGF12P61328 243 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 MXRA7P84157 204 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 ZNF92Q03936 586 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 TAF13Q15543 124 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 SNAI3Q3KNW1 292 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 ZNF841Q6ZN19 808 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 RASSF6Q6ZTQ3 369 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 C19orf18Q8NEA5 215 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 ZDHHC16Q969W1 377 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 TECTBQ96PL2 329 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 DDOQ99489 341 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 COPS4Q9BT78 406 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 TRIM15Q9C019 465 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 ZNF696Q9H7X3 374 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 UNKLQ9H9P5 680 aaKnown RBP15.63■□□□□ 0.09
CPSF2-203ENST00000554290 IL20Q9NYY1 176 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 MRPL15Q9P015 296 aaKnown RBP15.63■□□□□ 0.09
CPSF2-203ENST00000554290 KIF17Q9P2E2 1029 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 LYVE1Q9Y5Y7 322 aa15.63■□□□□ 0.09
CPSF2-203ENST00000554290 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.62■□□□□ 0.09
CPSF2-203ENST00000554290 LGALS8O00214 317 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 ATP8B1O43520 1251 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 NDUFA2O43678 99 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 LIPFP07098 398 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 MZT1Q08AG7 82 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 GPR157Q5UAW9 335 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 C16orf87Q6PH81 154 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 DCXRQ7Z4W1 244 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 DEFB107AQ8IZN7 70 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 BOLLQ8N9W6 283 aaKnown RBP15.62■□□□□ 0.09
CPSF2-203ENST00000554290 SLC37A3Q8NCC5 494 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 OR9Q2Q8NGE9 314 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 OR2AE1Q8NHA4 323 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 OPA3Q9H6K4 179 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 CENPMQ9NSP4 180 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 TBC1D23Q9NUY8 699 aa15.62■□□□□ 0.09
CPSF2-203ENST00000554290 SOX21Q9Y651 276 aaPredicted RBP15.62■□□□□ 0.09
CPSF2-203ENST00000554290 TRAV38-1A0A0B4J264 116 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 CCNB2O95067 398 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 PTBP3O95758 552 aaKnown RBP15.61■□□□□ 0.09
CPSF2-203ENST00000554290 GASTP01350 101 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 SPARCP09486 303 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 ENTPD1P49961 510 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 OR8B8Q15620 311 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 GLYATL3Q5SZD4 288 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 ZNF362Q5T0B9 420 aaPredicted RBP15.61■□□□□ 0.09
CPSF2-203ENST00000554290 SFRP4Q6FHJ7 346 aaPredicted RBP15.61■□□□□ 0.09
CPSF2-203ENST00000554290 BRD3OSQ6XYD6 125 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 LNX2Q8N448 690 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 OR51L1Q8NGJ5 315 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 OR9Q1Q8NGQ5 310 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 KCNJ15Q99712 375 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 BTBD10Q9BSF8 475 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 ARL8BQ9NVJ2 186 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 C14orf119Q9NWQ9 140 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 BAIAP2Q9UQB8 552 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 ARL2BPQ9Y2Y0 163 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 COMMD3-BMI1R4GMX3 469 aa15.61■□□□□ 0.09
CPSF2-203ENST00000554290 C22orf46C9J442 243 aa15.6■□□□□ 0.09
CPSF2-203ENST00000554290 C3orf80F5H4A9 247 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms