RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 RNLSQ5VYX0 342 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 TRIQKQ629K1 86 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 PLCXD3Q63HM9 321 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 LPCAT4Q643R3 524 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 PNCKQ6P2M8 343 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 PLET1Q6UQ28 207 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 MOXD1Q6UVY6 613 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 SPESP1Q6UW49 350 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 CES3Q6UWW8 571 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 ALKAL1Q6UXT8 129 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 BAIAP2L2Q6UXY1 529 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 C17orf107Q6ZR85 190 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 RASSF6Q6ZTQ3 369 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 SLC35D2Q76EJ3 337 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 PRSS48Q7RTY5 328 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 TIPARPQ7Z3E1 657 aaKnown RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 ZNF573Q86YE8 665 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 C9orf62Q8N4C0 152 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 ARRDC1Q8N5I2 433 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 RASGEF1AQ8N9B8 481 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 OR5T3Q8NGG3 340 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 WDR36Q8NI36 951 aaKnown RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 TRMT10AQ8TBZ6 339 aaKnown RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 SLC7A6Q92536 515 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 CNRIP1Q96F85 164 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 LINC00615Q96LM1 132 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 FAM218AQ96MZ4 157 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 GPR137Q96N19 417 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 SPATA13Q96N96 652 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 RNF2Q99496 336 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 UTP23Q9BRU9 249 aaKnown RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 MED10Q9BTT4 135 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 CCDC32Q9BV29 185 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 ANKRD60Q9BZ19 345 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 PRRG3Q9BZD7 231 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 ZNF436Q9C0F3 470 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 FN3KQ9H479 309 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 ST6GALNAC4Q9H4F1 302 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 FBXO44Q9H4M3 255 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 AUNIPQ9H7T9 357 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 NHEJ1Q9H9Q4 299 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 IL1RL2Q9HB29 575 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 PAK1IP1Q9NWT1 392 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 TAS2R9Q9NYW1 312 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 CALML5Q9NZT1 146 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 GSKIPQ9P0R6 139 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 PHF11Q9UIL8 331 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 RWDD2AQ9UIY3 292 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 GNG8Q9UK08 70 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 FBXO5Q9UKT4 447 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 ING4Q9UNL4 249 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 PSG11Q9UQ72 335 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 SLC6A5Q9Y345 797 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 MRPS18CQ9Y3D5 142 aaKnown RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 STRAPQ9Y3F4 350 aaKnown RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 WIPI2Q9Y4P8 454 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 MYLKQ15746 1914 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 CITO14578 2027 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 ANAPC1Q9H1A4 1944 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 PLXND1Q9Y4D7 1925 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 TRBV4-1A0A0J9YWV2 114 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 HELTA6NFD8 242 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 GJE1A6NN92 205 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 C1orf196B1AJZ1 125 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 M0R143 59 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 M0R3G1 203 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 AIPO00170 330 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 LGALS8O00214 317 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 DFFAO00273 331 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 WWP2O00308 870 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 CDIPTO14735 213 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 LCMT2O60294 686 aaKnown RBP3.8□□□□□ -1.8
ATXN3-225ENST00000554214 EDF1O60869 148 aaKnown RBP3.8□□□□□ -1.8
ATXN3-225ENST00000554214 ZMPSTE24O75844 475 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 PIAS1O75925 651 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 KCNK2O95069 426 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 CPNE6O95741 557 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 LALBAP00709 142 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 FTH1P02794 183 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 ERCC1P07992 297 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-225ENST00000554214 ANXA4P09525 319 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-225ENST00000554214 CXCL8P10145 99 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 HIST1H1BP16401 226 aaKnown RBP3.8□□□□□ -1.8
ATXN3-225ENST00000554214 AZGP1P25311 298 aaKnown RBP3.8□□□□□ -1.8
ATXN3-225ENST00000554214 STOMP27105 288 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 ELK4P28324 431 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 S100A2P29034 98 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 FMO3P31513 532 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 SHMT2P34897 504 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 MAGEA12P43365 314 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 GABRA4P48169 554 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 KCNJ3P48549 501 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 MRPL19P49406 292 aaKnown RBP3.8□□□□□ -1.8
ATXN3-225ENST00000554214 ACOT2P49753 483 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 KLF3P57682 345 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-225ENST00000554214 RPS20P60866 119 aaKnown RBP3.8□□□□□ -1.8
ATXN3-225ENST00000554214 CACNG1Q06432 222 aa3.8□□□□□ -1.8
ATXN3-225ENST00000554214 ORC2Q13416 577 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-225ENST00000554214 SNTB2Q13425 540 aaKnown RBP3.8□□□□□ -1.8
ATXN3-225ENST00000554214 OPCMLQ14982 345 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms