RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ALKBH2Q6NS38 261 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 GDPGP1Q6ZNW5 385 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 MRPL21Q7Z2W9 205 aaKnown RBP12.55□□□□□ -0.4
SHMT2-210ENST00000553950 PRSS35Q8N3Z0 413 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 FTMTQ8N4E7 242 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 ZFP41Q8N8Y5 198 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 ABHD4Q8TB40 342 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 PHYHIPQ92561 330 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 GHSRQ92847 366 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 C10orf35Q96D05 121 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 PLEKHA1Q9HB21 404 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 STUB1Q9UNE7 303 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 SLC22A13Q9Y226 551 aa12.55□□□□□ -0.4
SHMT2-210ENST00000553950 SMIM31A0A1B0GVY4 71 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 SYT7O43581 403 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 ATE1O95260 518 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 SLC2A1P11166 492 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 SELEP16581 610 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 CCL1P22362 96 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 GRNP28799 593 aaKnown RBP12.54□□□□□ -0.4
SHMT2-210ENST00000553950 LIPAP38571 399 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 UCP2P55851 309 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 HGFACQ04756 655 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 SSX1Q16384 188 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 RFPL4BQ6ZWI9 263 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 MYPOPQ86VE0 399 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-210ENST00000553950 NUP37Q8NFH4 326 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 TSEN15Q8WW01 171 aaKnown RBP12.54□□□□□ -0.4
SHMT2-210ENST00000553950 SPSB4Q96A44 273 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 REEP6Q96HR9 211 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 TMED9Q9BVK6 235 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 C1QTNF6Q9BXI9 259 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 RALYQ9UKM9 306 aaKnown RBP12.54□□□□□ -0.4
SHMT2-210ENST00000553950 SSR3Q9UNL2 185 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 DHDHQ9UQ10 334 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 MYO18BQ8IUG5 2567 aa12.54□□□□□ -0.4
SHMT2-210ENST00000553950 CLEC18AA5D8T8 446 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 VSTM5A8MXK1 200 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 ZNF879B4DU55 563 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 DHRS3O75911 302 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 ARL6IP5O75915 188 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 IGLV3-1P01715 115 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 CD3EP07766 207 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 CCL2P13500 99 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 IGFBP2P18065 325 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 TGFBR2P37173 567 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 WNT5AP41221 380 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 PPP1CBP62140 327 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 BSPH1Q075Z2 132 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 GFOD2Q3B7J2 385 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 SNAI3Q3KNW1 292 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 Q499Y3 187 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 NCMAPQ5T1S8 102 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 ZBTB37Q5TC79 503 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 CLEC18BQ6UXF7 455 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 DMRTC2Q8IXT2 367 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-210ENST00000553950 CLEC18CQ8NCF0 446 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 ZNF420Q8TAQ5 688 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-210ENST00000553950 RAB2BQ8WUD1 216 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 RNF166Q96A37 237 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-210ENST00000553950 YIPF6Q96EC8 236 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 PDCD1LG2Q9BQ51 273 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 GPR84Q9NQS5 396 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 GSTK1Q9Y2Q3 226 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 N6AMT1Q9Y5N5 214 aa12.53□□□□□ -0.4
SHMT2-210ENST00000553950 PRR14LQ5THK1 2151 aa12.52□□□□□ -0.4
SHMT2-210ENST00000553950 RTTNQ86VV8 2226 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-210ENST00000553950 ABCD4O14678 606 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 GABARAPO95166 117 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 RAF1P04049 648 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 OCM2P0CE71 109 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 NR4A1P22736 598 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 DDOSTP39656 456 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 MAP2K3P46734 347 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 SELENOVP59797 346 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 RPS25P62851 125 aaKnown RBP12.52□□□□□ -0.41
SHMT2-210ENST00000553950 SNTB2Q13425 540 aaKnown RBP12.52□□□□□ -0.41
SHMT2-210ENST00000553950 GLYATL3Q5SZD4 288 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 RGS7BPQ6MZT1 257 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-210ENST00000553950 CD200R1LQ6Q8B3 271 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 SLC22A25Q6T423 547 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 FBXW12Q6X9E4 464 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 SATL1Q86VE3 508 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 ANKRD13BQ86YJ7 626 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 ZNF101Q8IZC7 436 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 PIAS4Q8N2W9 510 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-210ENST00000553950 PAQR4Q8N4S7 273 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-210ENST00000553950 CSNK2A3Q8NEV1 391 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 OR1J1Q8NGS3 322 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 OR13C3Q8NGS6 347 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 LINC01560Q8TB33 94 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 OR51E1Q8TCB6 317 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 PLPPR2Q96GM1 343 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 FUNDC2Q9BWH2 189 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 ZNF442Q9H7R0 627 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 NEK6Q9HC98 313 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 ABCB9Q9NP78 766 aa12.52□□□□□ -0.41
SHMT2-210ENST00000553950 CKLFQ9UBR5 152 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms