RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MED20Q9H944 212 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 SAP30LQ9HAJ7 183 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 DLL4Q9NR61 685 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 MRPL22Q9NWU5 206 aaKnown RBP7.13□□□□□ -1.27
PSEN1-209ENST00000553855 IMPAD1Q9NX62 359 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 NKIRAS2Q9NYR9 191 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 PTTG3PQ9NZH4 202 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-209ENST00000553855 ZDHHC8Q9ULC8 765 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 OAZ3Q9UMX2 235 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 STARD10Q9Y365 291 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 NOP16Q9Y3C1 178 aaKnown RBP7.13□□□□□ -1.27
PSEN1-209ENST00000553855 TMEM14AQ9Y6G1 99 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 DNHD1Q96M86 4753 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 ROS1P08922 2347 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 ALPK2Q86TB3 2170 aa7.13□□□□□ -1.27
PSEN1-209ENST00000553855 HEATR1Q9H583 2144 aaKnown RBP7.13□□□□□ -1.27
PSEN1-209ENST00000553855 HRNRQ86YZ3 2850 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-209ENST00000553855 CADP27708 2225 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 PRRC2AP48634 2157 aaKnown RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 PRR14LQ5THK1 2151 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 CSMD1Q96PZ7 3565 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 IGHV4-30-2A0A087WSY4 118 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 SNTNA6NMZ2 147 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 TLX2O43763 284 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 LY6HO94772 140 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 ANXA2P07355 339 aaKnown RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 LYNP07948 512 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 DBHP09172 617 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 PF4V1P10720 104 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 CLUP10909 449 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 TNFRSF1AP19438 455 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 FSTP19883 344 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 ACHEP22303 614 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 ATP6V1E1P36543 226 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 MPV17P39210 176 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 GPR6P46095 362 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 PRKXP51817 358 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 SCAND1P57086 179 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 MRPS11P82912 194 aaKnown RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 APOFQ13790 326 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 TSTQ16762 297 aaKnown RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 HFEQ30201 348 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF362Q5T0B9 420 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 KDM4DQ6B0I6 523 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 KCTD18Q6PI47 426 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 DRAM2Q6UX65 266 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 PGAP1Q75T13 922 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 DPY19L4Q7Z388 723 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 PEG10Q86TG7 708 aaKnown RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 GID4Q8IVV7 300 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 ZCCHC24Q8N2G6 241 aaKnown RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF786Q8N393 782 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 C10orf105Q8TEF2 133 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 SPRYD4Q8WW59 207 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 SLC7A6Q92536 515 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 EME1Q96AY2 570 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 HAVCR1Q96D42 359 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 ZMYND19Q96E35 227 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 JMJD8Q96S16 334 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 DDOQ99489 341 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 PKP2Q99959 881 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 OPA3Q9H6K4 179 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 WDR76Q9H967 626 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 CHODLQ9H9P2 273 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 S100A14Q9HCY8 104 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 MYEF2Q9P2K5 600 aaKnown RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 LAMP5Q9UJQ1 280 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 PURGQ9UJV8 347 aaKnown RBP7.12□□□□□ -1.27
PSEN1-209ENST00000553855 N6AMT1Q9Y5N5 214 aa7.12□□□□□ -1.27
PSEN1-209ENST00000553855 OTOGQ6ZRI0 2925 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 CSMD2Q7Z408 3487 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 IGHV1-69-2A0A0G2JMI3 117 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 GGT3PA6NGU5 568 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 ZAR1LA6NP61 321 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 PHYHO14832 338 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 PPIHO43447 177 aaKnown RBP7.11□□□□□ -1.27
PSEN1-209ENST00000553855 XRCC2O43543 280 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 MITFO75030 526 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-209ENST00000553855 ACSM4P0C7M7 580 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 KITLGP21583 273 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 CFL1P23528 166 aaKnown RBP7.11□□□□□ -1.27
PSEN1-209ENST00000553855 RPS27P42677 84 aaKnown RBP7.11□□□□□ -1.27
PSEN1-209ENST00000553855 NR4A2P43354 598 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 GZMKP49863 264 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 CHN2P52757 468 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 TMEM33P57088 247 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 CCL8P80075 99 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 TNFAIP6P98066 277 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-209ENST00000553855 GABPB1Q06547 395 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-209ENST00000553855 LOXL1Q08397 574 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-209ENST00000553855 MZT1Q08AG7 82 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 PSG7Q13046 419 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 SNCBQ16143 134 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 MSMPQ1L6U9 139 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 SLX4IPQ5VYV7 408 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 NXNL2Q5VZ03 156 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 FBXW12Q6X9E4 464 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 ZBTB49Q6ZSB9 765 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 RHOUQ7L0Q8 258 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms