RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PSMD5Q16401 504 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 NRF1Q16656 503 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ALKBH6Q3KRA9 238 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 TSPO2Q5TGU0 170 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 C11orf71Q6IPW1 123 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ANKRD26P1Q6NSI1 321 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 REEP3Q6NUK4 255 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 CNIH2Q6PI25 160 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 UNQ9370/PRO34162Q6UXP9 181 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ZFP2Q6ZN57 461 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 NIPA1Q7RTP0 329 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 TMEM135Q86UB9 458 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 SAXO1Q8IYX7 474 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 RDH10Q8IZV5 341 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 TRIML2Q8N7C3 387 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 OR10G3Q8NGC4 313 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 OR51S1Q8NGJ8 323 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 OR9G1Q8NH87 305 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ITFG1Q8TB96 612 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF502Q8TBZ5 544 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ACMSDQ8TDX5 336 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 GPX8Q8TED1 209 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 OR1E3Q8WZA6 343 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF75CPQ92670 426 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 SMARCD2Q92925 531 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ECHDC3Q96DC8 303 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 JSRP1Q96MG2 331 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 XPO6Q96QU8 1125 aaKnown RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ECSITQ9BQ95 431 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 TEKT3Q9BXF9 490 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 PLA2G2FQ9BZM2 168 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 RGCCQ9H4X1 137 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ELOVL6Q9H5J4 265 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ANKRA2Q9H9E1 313 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 HEBP1Q9NRV9 189 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 AIG1Q9NVV5 245 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 GPATCH2LQ9NWQ4 482 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 HRASLS2Q9NWW9 162 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 SHPKQ9UHJ6 478 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 LSM7Q9UK45 103 aaKnown RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 TBC1D24Q9ULP9 559 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 NDRG2Q9UN36 371 aaKnown RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 CHTOPQ9Y3Y2 248 aaKnown RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 UGT2A1Q9Y4X1 527 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 MYH7P12883 1935 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 LOXHD1Q8IVV2 1947 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 MTCL1Q9Y4B5 1905 aaKnown RBP2.19□□□□□ -2.06
SCFD1-210ENST00000553693 KBTBD11-OT1A0A1B0GTJ5 212 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 A0A1W2PPV9 198 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 LYRM9A8MSI8 78 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 GFYI3L273 518 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 NDUFAB1O14561 156 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 TRDMT1O14717 391 aaKnown RBP2.19□□□□□ -2.06
SCFD1-210ENST00000553693 ZBTB5O15062 677 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 CYTH3O43739 400 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 KALRNO60229 2985 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 OR2F2O95006 317 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 MBP02144 154 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 ALDOBP05062 364 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 CCNB1P14635 433 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 RCC1P18754 421 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-210ENST00000553693 BCKDHBP21953 392 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 LONP1P36776 959 aaKnown RBP2.19□□□□□ -2.06
SCFD1-210ENST00000553693 SLC26A3P40879 764 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 NAMPTP43490 491 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 KIR2DS4P43632 304 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 VDAC2P45880 294 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-210ENST00000553693 CXCL12P48061 93 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 CSNK1EP49674 416 aaKnown RBP2.19□□□□□ -2.06
SCFD1-210ENST00000553693 KLK7P49862 253 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 SSR4P51571 173 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 SUB1P53999 127 aaKnown RBP eCLIP2.19□□□□□ -2.06
SCFD1-210ENST00000553693 RAB11AP62491 216 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 ACTA2P62736 377 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 ACTG2P63267 376 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 ACTC1P68032 377 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 ACTA1P68133 377 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 TGFBR3Q03167 851 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 TWF1Q12792 350 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 ALX1Q15699 326 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 RAB11BQ15907 218 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 MRPL23Q16540 153 aaKnown RBP2.19□□□□□ -2.06
SCFD1-210ENST00000553693 KLHL40Q2TBA0 621 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 OR2G6Q5TZ20 316 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 GPR157Q5UAW9 335 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 SASS6Q6UVJ0 657 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF836Q6ZNA1 936 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 Q6ZS52 159 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 CMC1Q7Z7K0 106 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 SCD5Q86SK9 330 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 OAFQ86UD1 273 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 IQCKQ8N0W5 287 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF740Q8NDX6 193 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 CATSPER1Q8NEC5 780 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 OR5T3Q8NGG3 340 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 OR1N2Q8NGR9 330 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 OR5B3Q8NH48 314 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 FGF13Q92913 245 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 TCEAL3Q969E4 200 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 C8orf44Q96CB5 159 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms