RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 AKAP1Q92667 903 aaKnown RBP eCLIP13.5□□□□□ -0.25
ABCD4-218ENST00000553486 GCDHQ92947 438 aaPredicted RBP13.5□□□□□ -0.25
ABCD4-218ENST00000553486 SORCS2Q96PQ0 1159 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 RBM24Q9BX46 236 aaKnown RBP13.5□□□□□ -0.25
ABCD4-218ENST00000553486 ULBP2Q9BZM5 246 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 HRASLSQ9HDD0 168 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 RCE1Q9Y256 329 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 N6AMT1Q9Y5N5 214 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 NCOA6Q14686 2063 aaPredicted RBP13.5□□□□□ -0.25
ABCD4-218ENST00000553486 TRAV6A0A075B6T7 132 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 LOC390937A0A1W2PQ73 354 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 ANKRD20A5PA0PJZ0 165 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 LMX1BO60663 402 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 F10P00742 488 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 CTSSP25774 331 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 GNALP38405 381 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 CX3CR1P49238 355 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 SELENOPP49908 381 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 EFNB2P52799 333 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 ZNF121P58317 390 aaPredicted RBP13.5□□□□□ -0.25
ABCD4-218ENST00000553486 DEFB109BQ30KR1 87 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 ATP1A1-AS1Q5TC04 95 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 DNM1P46Q6ZS02 220 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 DEDD2Q8WXF8 326 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 FER1L6-AS2Q96M78 137 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 ATG5Q9H1Y0 275 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 RANGRFQ9HD47 186 aaPredicted RBP13.5□□□□□ -0.25
ABCD4-218ENST00000553486 ZNF71Q9NQZ8 489 aaPredicted RBP13.5□□□□□ -0.25
ABCD4-218ENST00000553486 MRPL15Q9P015 296 aaKnown RBP13.5□□□□□ -0.25
ABCD4-218ENST00000553486 B4GALT7Q9UBV7 327 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 KLK11Q9UBX7 282 aa13.5□□□□□ -0.25
ABCD4-218ENST00000553486 CGGBP1Q9UFW8 167 aaPredicted RBP13.5□□□□□ -0.25
ABCD4-218ENST00000553486 A0A1B0GTI1 187 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 PINLYPA6NC86 204 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 CXCL13O43927 109 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 RBBP9O75884 186 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 NEURL1O76050 574 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 H2AFB2P0C5Z0 115 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 ZNF20P17024 532 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 CCR6P51684 374 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 NKX2-5P52952 324 aaPredicted RBP13.49□□□□□ -0.25
ABCD4-218ENST00000553486 CD83Q01151 205 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 CDH24Q86UP0 819 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 OR2M7Q8NG81 312 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 OR1M1Q8NGA1 313 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 OR8B12Q8NGG6 310 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 OR1J2Q8NGS2 313 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 OR10D3Q8NH80 312 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 OR51E1Q8TCB6 317 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 ABHD17AQ96GS6 310 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 ZNF486Q96H40 463 aaPredicted RBP13.49□□□□□ -0.25
ABCD4-218ENST00000553486 ADGRG7Q96K78 797 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 TMEM138Q9NPI0 162 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 ING3Q9NXR8 418 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 FLVCR1Q9Y5Y0 555 aa13.49□□□□□ -0.25
ABCD4-218ENST00000553486 TRAV18A0A075B6X5 111 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 ERCC1P07992 297 aaPredicted RBP13.48□□□□□ -0.25
ABCD4-218ENST00000553486 RAB3AP20336 220 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 STARP49675 285 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 GFRA1P56159 465 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 ENDOGQ14249 297 aaKnown RBP13.48□□□□□ -0.25
ABCD4-218ENST00000553486 ELFN2Q5R3F8 820 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 OLFML2AQ68BL7 652 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 ZNF813Q6ZN06 617 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 ADGRE4PQ86SQ3 457 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 TCTE3Q8IZS6 198 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 OR56B4Q8NH76 319 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 PTX4Q96A99 478 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 NABP1Q96AH0 204 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 ADAT3Q96EY9 351 aaPredicted RBP13.48□□□□□ -0.25
ABCD4-218ENST00000553486 SCMH1Q96GD3 660 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 DMRTB1Q96MA1 342 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 TAS2R8Q9NYW2 309 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 A0A0A6YYH2 397 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 A0A0A6YYJ9 748 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 CIB4A0PJX0 185 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 C7orf66A4D0T2 115 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 A6NJ64 397 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 H7C417 338 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 APOC1P02654 83 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 PTHLHP12272 177 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 GABRA1P14867 456 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 HIST1H3AP68431 136 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 MRPS34P82930 218 aaKnown RBP13.48□□□□□ -0.25
ABCD4-218ENST00000553486 OR1C1Q15619 314 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 HIST2H3PS2Q5TEC6 136 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 ABLIM2Q6H8Q1 611 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 HIST2H3AQ71DI3 136 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 DOK3Q7L591 496 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 ABHD12BQ7Z5M8 362 aaPredicted RBP13.48□□□□□ -0.25
ABCD4-218ENST00000553486 COMMD2Q86X83 199 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 LYPD6Q86Y78 171 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 SLC22A24Q8N4F4 322 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 CLEC1AQ8NC01 280 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 CPNE4Q96A23 557 aaPredicted RBP13.48□□□□□ -0.25
ABCD4-218ENST00000553486 SIGLEC12Q96PQ1 595 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 UQCC2Q9BRT2 126 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 MTFP1Q9UDX5 166 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 KCNMB2Q9Y691 235 aa13.48□□□□□ -0.25
ABCD4-218ENST00000553486 ZNF716A6NP11 495 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms