RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 PBOV1Q9GZY1 135 aa12.24□□□□□ -0.45
CACNB3-216ENST00000550391 SLC22A13Q9Y226 551 aa12.24□□□□□ -0.45
CACNB3-216ENST00000550391 ZNF281Q9Y2X9 895 aa12.24□□□□□ -0.45
CACNB3-216ENST00000550391 CEPT1Q9Y6K0 416 aa12.24□□□□□ -0.45
CACNB3-216ENST00000550391 DIDO1Q9BTC0 2240 aaKnown RBP12.23□□□□□ -0.45
CACNB3-216ENST00000550391 ZG16O60844 167 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 SERPINA3P01011 423 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 IGLV1-44P01699 117 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 LCATP04180 440 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 ISG15P05161 165 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 SLC2A1P11166 492 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 PRF1P14222 555 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 GALP22466 123 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 TMBIM6P55061 237 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 TBC1D28Q2M2D7 210 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 YIF1BQ5BJH7 314 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 C22orf34Q6ZV56 151 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 ZNF808Q8N4W9 903 aaPredicted RBP12.23□□□□□ -0.45
CACNB3-216ENST00000550391 OR52H1Q8NGJ2 320 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 ZNF420Q8TAQ5 688 aaPredicted RBP12.23□□□□□ -0.45
CACNB3-216ENST00000550391 TMEM203Q969S6 136 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 PPP1R14AQ96A00 147 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 C1QTNF6Q9BXI9 259 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 ENPP5Q9UJA9 477 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 STUB1Q9UNE7 303 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 SSR3Q9UNL2 185 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 N6AMT1Q9Y5N5 214 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 RTTNQ86VV8 2226 aa12.23□□□□□ -0.45
CACNB3-216ENST00000550391 CCDC160A6NGH7 325 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 AIREO43918 545 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 NOL3O60936 208 aaKnown RBP12.22□□□□□ -0.45
CACNB3-216ENST00000550391 CLDN14O95500 239 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 TTRP02766 147 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 HLA-DPB1P04440 258 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 CELA3BP08861 270 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 UBCP0CG48 685 aaKnown RBP12.22□□□□□ -0.45
CACNB3-216ENST00000550391 CCL2P13500 99 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 CCNOP22674 350 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 ANOS1P23352 680 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 CRYBB2P43320 205 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 TFF3Q07654 80 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 TMEM244Q5VVB8 128 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 CD200R1LQ6Q8B3 271 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 SEZ6L2Q6UXD5 910 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 GDPGP1Q6ZNW5 385 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 COLCA1Q6ZS62 124 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 MYPOPQ86VE0 399 aaPredicted RBP12.22□□□□□ -0.45
CACNB3-216ENST00000550391 OR8B12Q8NGG6 310 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 ABHD4Q8TB40 342 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 DGCR14Q96DF8 476 aaKnown RBP12.22□□□□□ -0.45
CACNB3-216ENST00000550391 BCL7BQ9BQE9 202 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 C1QTNF5Q9BXJ0 243 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 RBM38Q9H0Z9 239 aaKnown RBP12.22□□□□□ -0.45
CACNB3-216ENST00000550391 OR10A2Q9H208 303 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 OR51E2Q9H255 320 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 CDH20Q9HBT6 801 aa12.22□□□□□ -0.45
CACNB3-216ENST00000550391 IGHV1-18A0A0C4DH31 117 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 A0A0U1RQV5 110 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 TRDV1A0A1B0GX56 115 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 TBX1O43435 398 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 GPX5O75715 221 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 RGS9O75916 674 aaPredicted RBP12.21□□□□□ -0.45
CACNB3-216ENST00000550391 GABARAPO95166 117 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 CECR9P0C854 216 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 ACHEP22303 614 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 ZNF83P51522 516 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 SORDQ00796 357 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 FABP5Q01469 135 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 ODF4Q2M2E3 257 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 SLC16A12Q6ZSM3 486 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 RDH10Q8IZV5 341 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 GPR148Q8TDV2 347 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 RAB2BQ8WUD1 216 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 APOBEC3DQ96AK3 386 aaPredicted RBP12.21□□□□□ -0.45
CACNB3-216ENST00000550391 CHCHD6Q9BRQ6 235 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 NAA50Q9GZZ1 169 aaKnown RBP12.21□□□□□ -0.45
CACNB3-216ENST00000550391 SLC24A3Q9HC58 644 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 EXOSC4Q9NPD3 245 aaKnown RBP12.21□□□□□ -0.45
CACNB3-216ENST00000550391 NPAP1Q9NZP6 1156 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 ZNF319Q9P2F9 582 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 EIF3KQ9UBQ5 218 aaKnown RBP12.21□□□□□ -0.45
CACNB3-216ENST00000550391 HHLA2Q9UM44 414 aa12.21□□□□□ -0.45
CACNB3-216ENST00000550391 LOC100506127A0A0U1RQW1 187 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 A0A1B0GVI7 797 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 C5orf63A6NC05 138 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 ZNF701M0R085 212 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-216ENST00000550391 M0R1B8 84 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 P2RY10O00398 339 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 GATBO75879 557 aaKnown RBP12.2□□□□□ -0.46
CACNB3-216ENST00000550391 THBDP07204 575 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 NR4A1P22736 598 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 RPS11P62280 158 aaKnown RBP eCLIP12.2□□□□□ -0.46
CACNB3-216ENST00000550391 SNAI3Q3KNW1 292 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 ACSM3Q53FZ2 586 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 ALKBH2Q6NS38 261 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 PAMR1Q6UXH9 720 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 TMEM91Q6ZNR0 172 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 CEACAM19Q7Z692 300 aa12.2□□□□□ -0.46
CACNB3-216ENST00000550391 PAQR4Q8N4S7 273 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-216ENST00000550391 OR13C5Q8NGS8 318 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms