RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 CGGBP1Q9UFW8 167 aaPredicted RBP6.65□□□□□ -1.34
RNF41-208ENST00000550379 ENPP5Q9UJA9 477 aa6.65□□□□□ -1.34
RNF41-208ENST00000550379 FBXO9Q9UK97 447 aaPredicted RBP6.65□□□□□ -1.34
RNF41-208ENST00000550379 OR52A1Q9UKL2 312 aa6.65□□□□□ -1.34
RNF41-208ENST00000550379 HHLA2Q9UM44 414 aa6.65□□□□□ -1.34
RNF41-208ENST00000550379 STUB1Q9UNE7 303 aa6.65□□□□□ -1.34
RNF41-208ENST00000550379 V9GYS6 101 aa6.65□□□□□ -1.34
RNF41-208ENST00000550379 RELNP78509 3460 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 FASNP49327 2511 aaKnown RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 IGLV3-9A0A075B6K5 115 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 IGHV2OR16-5A0A0B4J2B6 119 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 IGHV1-18A0A0C4DH31 117 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 EIF4E1BA6NMX2 242 aaKnown RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 SLC22A1O15245 554 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 ZG16O60844 167 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 DHRS3O75911 302 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 ARL6IP5O75915 188 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 CRYAAP02489 173 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 UCHL1P09936 223 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 CECR9P0C854 216 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 CD79AP11912 226 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 ZNF250P15622 560 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 CD36P16671 472 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 CD40P25942 277 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 APEX1P27695 318 aaKnown RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 PSMB9P28065 219 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 CX3CR1P49238 355 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 GTF2A1P52655 376 aaPredicted RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 UCP2P55851 309 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 RPS23P62266 143 aaKnown RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 TUBA1BP68363 451 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 DYNC1I2Q13409 638 aaKnown RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 TAF13Q15543 124 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 NEDD8Q15843 81 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 Q499Y3 187 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 BEX5Q5H9J7 111 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 NCMAPQ5T1S8 102 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 MBNL2Q5VZF2 373 aaKnown RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 TMEM91Q6ZNR0 172 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 SLC16A12Q6ZSM3 486 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 C22orf34Q6ZV56 151 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 NCCRP1Q6ZVX7 275 aaPredicted RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 TUBA1AQ71U36 451 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 DOK3Q7L591 496 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 TPRA1Q86W33 373 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 DMRTC2Q8IXT2 367 aaPredicted RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 OR8B12Q8NGG6 310 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 AKR7LQ8NHP1 331 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 ABHD4Q8TB40 342 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 SMAP2Q8WU79 429 aaPredicted RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 PP6455Q8WZ26 134 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 AKAP1Q92667 903 aaKnown RBP eCLIP6.64□□□□□ -1.35
RNF41-208ENST00000550379 SGK3Q96BR1 496 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 HAVCR1Q96D42 359 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 WFIKKN1Q96NZ8 548 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 FUNDC2Q9BWH2 189 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 ABCB9Q9NP78 766 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 NPDC1Q9NQX5 325 aaPredicted RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 ZNF275Q9NSD4 429 aaPredicted RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 ZNF319Q9P2F9 582 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 EIF3KQ9UBQ5 218 aaKnown RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 SH3BGRL2Q9UJC5 107 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 FOXJ3Q9UPW0 622 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 SPEF1Q9Y4P9 236 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 CEPT1Q9Y6K0 416 aa6.64□□□□□ -1.35
RNF41-208ENST00000550379 USP9YO00507 2555 aaPredicted RBP6.64□□□□□ -1.35
RNF41-208ENST00000550379 hCG_38984A0A1B0GV85 526 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 C5orf49A4QMS7 147 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 MEGF11A6BM72 1044 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 TUBAL3A6NHL2 446 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 ZNF879B4DU55 563 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 F5H5K5 113 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 SMPD2O60906 423 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 PRB1P04280 392 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 ALDOBP05062 364 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 CD2P06729 351 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 ADH4P08319 380 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 PATE4P0C8F1 98 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 SELEP16581 610 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 IGFBP3P17936 291 aaPredicted RBP6.63□□□□□ -1.35
RNF41-208ENST00000550379 KITLGP21583 273 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 LOXP28300 417 aaPredicted RBP6.63□□□□□ -1.35
RNF41-208ENST00000550379 WNT5AP41221 380 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 PSMD7P51665 324 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 SCAND1P57086 179 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 HGFACQ04756 655 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 SRSF1Q07955 248 aaKnown RBP eCLIP6.63□□□□□ -1.35
RNF41-208ENST00000550379 MFGE8Q08431 387 aaPredicted RBP6.63□□□□□ -1.35
RNF41-208ENST00000550379 CDSNQ15517 529 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 TSTQ16762 297 aaKnown RBP6.63□□□□□ -1.35
RNF41-208ENST00000550379 ZMAT1Q5H9K5 638 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 BCL2L15Q5TBC7 163 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 C9orf135Q5VTT2 229 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 LIPKQ5VXJ0 399 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 PGAP1Q75T13 922 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 LYPD6Q86Y78 171 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 ZNF283Q8N7M2 679 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 CSNK2A3Q8NEV1 391 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 OR14K1Q8NGZ2 314 aa6.63□□□□□ -1.35
RNF41-208ENST00000550379 SSC4DQ8WTU2 575 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms