RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 SLC18B1Q6NT16 456 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 C16orf87Q6PH81 154 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 FITM2Q8N6M3 262 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 BHLHE23Q8NDY6 225 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 SLC26A10Q8NG04 563 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 OR11L1Q8NGX0 322 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 TMIGD2Q96BF3 282 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 C7orf34Q96L11 122 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 DHRS1Q96LJ7 313 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 TSSK2Q96PF2 358 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 ATF6BQ99941 703 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 KCTD14Q9BQ13 255 aaPredicted RBP6.35□□□□□ -1.39
NEK3-201ENST00000550331 NUDT16L1Q9BRJ7 211 aaKnown RBP6.35□□□□□ -1.39
NEK3-201ENST00000550331 SLC22A4Q9H015 551 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 CCDC134Q9H6E4 229 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 ABCD2Q9UBJ2 740 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 CLN8Q9UBY8 286 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 SAMD4AQ9UPU9 718 aaKnown RBP6.35□□□□□ -1.39
NEK3-201ENST00000550331 AURKCQ9UQB9 309 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 NOP16Q9Y3C1 178 aaKnown RBP6.35□□□□□ -1.39
NEK3-201ENST00000550331 MMP24Q9Y5R2 645 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 TRBV4-1A0A0J9YWV2 114 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 MDFIC2A0A1B0GVS7 189 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 SRRM5B3KS81 715 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 HOXA3O43365 443 aaPredicted RBP6.34□□□□□ -1.39
NEK3-201ENST00000550331 CCDC22O60826 627 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 PTBP3O95758 552 aaKnown RBP6.34□□□□□ -1.39
NEK3-201ENST00000550331 GPANK1O95872 356 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 RENP00797 406 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 HLA-DPB1P04440 258 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 LIPFP07098 398 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 ACSM4P0C7M7 580 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 NCK1P16333 377 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 MDKP21741 143 aaPredicted RBP6.34□□□□□ -1.39
NEK3-201ENST00000550331 MDH1P40925 334 aaKnown RBP6.34□□□□□ -1.39
NEK3-201ENST00000550331 PMELP40967 661 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 CENPAP49450 140 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 NUDT2P50583 147 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 RAD23AP54725 363 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 SMIM11AP58511 58 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 FGF12P61328 243 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 TRAP1Q12931 704 aaKnown RBP6.34□□□□□ -1.39
NEK3-201ENST00000550331 MAB21L1Q13394 359 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 GK2Q14410 553 aaPredicted RBP6.34□□□□□ -1.39
NEK3-201ENST00000550331 KRT72Q14CN4 511 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 KCNJ8Q15842 424 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 RSPO1Q2MKA7 263 aaPredicted RBP6.34□□□□□ -1.39
NEK3-201ENST00000550331 RFX4Q33E94 735 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 SLC36A3Q495N2 470 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 GPR157Q5UAW9 335 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 CORO6Q6QEF8 472 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 BRD3OSQ6XYD6 125 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 Q6YL49 198 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 ZNF841Q6ZN19 808 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 CFAP77Q6ZQR2 320 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 SPATC1Q76KD6 591 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.34□□□□□ -1.39
NEK3-201ENST00000550331 ZBTB46Q86UZ6 589 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 JAZF1Q86VZ6 243 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 OR6V1Q8N148 313 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 TMEM86BQ8N661 226 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 PLPP7Q8NBV4 271 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 OR10S1Q8NGN2 331 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 OR2AJ1Q8NGZ0 328 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 FANK1Q8TC84 345 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 ERMAPQ96PL5 475 aaPredicted RBP6.34□□□□□ -1.39
NEK3-201ENST00000550331 NMNAT3Q96T66 252 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 PITX2Q99697 317 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 FUZQ9BT04 418 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 WDR76Q9H967 626 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 NOX4Q9NPH5 578 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 PNRC2Q9NPJ4 139 aaKnown RBP6.34□□□□□ -1.39
NEK3-201ENST00000550331 TRIM36Q9NQ86 728 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 CYB5R1Q9UHQ9 305 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 KCNG2Q9UJ96 466 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 B9D1Q9UPM9 204 aa6.34□□□□□ -1.39
NEK3-201ENST00000550331 SOX21Q9Y651 276 aaPredicted RBP6.34□□□□□ -1.39
NEK3-201ENST00000550331 IGHV3-64DA0A0J9YX35 117 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 C22orf46C9J442 243 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 F5H5K5 113 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 P2RY10O00398 339 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 IDH3BO43837 385 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 GMDSO60547 372 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 FAM20BO75063 409 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 NDUFA7O95182 113 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 KNG1P01042 644 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 LCATP04180 440 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 GGT2P36268 569 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 IFNGR2P38484 337 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 TPTEP56180 551 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 PSMA6P60900 246 aaKnown RBP6.33□□□□□ -1.4
NEK3-201ENST00000550331 RPL15P61313 204 aaKnown RBP6.33□□□□□ -1.4
NEK3-201ENST00000550331 OR8G1Q15617 311 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 DEFB112Q30KQ8 113 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 C11orf91Q3C1V1 193 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 CLEC12AQ5QGZ9 265 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 FAM201AQ5SY85 155 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 CD276Q5ZPR3 534 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 GLYATQ6IB77 296 aa6.33□□□□□ -1.4
NEK3-201ENST00000550331 PGAP1Q75T13 922 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms