RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 CENPAP49450 140 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 BTG1P62324 171 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.19□□□□□ -0.78
DDX54-206ENST00000549271 CLEC12AQ5QGZ9 265 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 SAMD5Q5TGI4 173 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 DNM1P34Q6PK57 102 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 CORO6Q6QEF8 472 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 Q6ZR03 302 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 AQP11Q8NBQ7 271 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 SDR9C7Q8NEX9 313 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 FAM110DQ8TAY7 271 aaPredicted RBP10.19□□□□□ -0.78
DDX54-206ENST00000549271 ZNRF4Q8WWF5 429 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 SIGLEC11Q96RL6 698 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 MRI1Q9BV20 369 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 CHID1Q9BWS9 393 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 DGCR6LQ9BY27 220 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 FN3KQ9H479 309 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 MRPL22Q9NWU5 206 aaKnown RBP10.19□□□□□ -0.78
DDX54-206ENST00000549271 SAMHD1Q9Y3Z3 626 aaKnown RBP10.19□□□□□ -0.78
DDX54-206ENST00000549271 U3KQV3 271 aa10.19□□□□□ -0.78
DDX54-206ENST00000549271 SRRM5B3KS81 715 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 FSTL3O95633 263 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 CRYBA1P05813 215 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 RAP2AP10114 183 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 GGT2P36268 569 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 COX10Q12887 443 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 ZMYND11Q15326 602 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 KRTAP27-1Q3LI81 207 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 SLC18B1Q6NT16 456 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 RPL13AP3Q6NVV1 102 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 FIP1L1Q6UN15 594 aaKnown RBP10.18□□□□□ -0.78
DDX54-206ENST00000549271 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.18□□□□□ -0.78
DDX54-206ENST00000549271 TMEM179BQ7Z7N9 219 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 PARP8Q8N3A8 854 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 LNX2Q8N448 690 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 CYB561A3Q8NBI2 242 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 GJC3Q8NFK1 279 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 OR4Q3Q8NH05 313 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 CANT1Q8WVQ1 401 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 PTP4A1Q93096 173 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 LRGUKQ96M69 825 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 DCLRE1CQ96SD1 692 aaKnown RBP10.18□□□□□ -0.78
DDX54-206ENST00000549271 TSSK6Q9BXA6 273 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 REEP1Q9H902 201 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 CYB5R1Q9UHQ9 305 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 ATPIF1Q9UII2 106 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 PPP1R3CQ9UQK1 317 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 RNF114Q9Y508 228 aa10.18□□□□□ -0.78
DDX54-206ENST00000549271 IGHV3OR16-10A0A075B7F0 116 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 C5orf63A6NC05 138 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 AQP12BA6NM10 295 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 TMEM178BH3BS89 294 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 GYG2O15488 501 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 WNT2P09544 360 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 RAC2P15153 192 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 PYCR1P32322 319 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 MDH2P40926 338 aaKnown RBP10.17□□□□□ -0.78
DDX54-206ENST00000549271 RGS6P49758 472 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 PROK1P58294 105 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 PAX2Q02962 417 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 PAX8Q06710 450 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 PDCD1Q15116 288 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 SLC27A4Q6P1M0 643 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 CD300LDQ6UXZ3 194 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 FBXW12Q6X9E4 464 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 CFAP77Q6ZQR2 320 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 LINC00346Q8IVM7 164 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 AQP12AQ8IXF9 295 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 MUC20Q8N307 709 aaPredicted RBP10.17□□□□□ -0.78
DDX54-206ENST00000549271 SLC37A3Q8NCC5 494 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 OR2Z1Q8NG97 314 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 OR52L1Q8NGH7 329 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 ITLN1Q8WWA0 313 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 CMBLQ96DG6 245 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 FEVQ99581 238 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 COQ7Q99807 217 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 NIPSNAP1Q9BPW8 284 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 PNRC2Q9NPJ4 139 aaKnown RBP10.17□□□□□ -0.78
DDX54-206ENST00000549271 LRCH1Q9Y2L9 728 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 POLR1DQ9Y2S0 133 aa10.17□□□□□ -0.78
DDX54-206ENST00000549271 TET2Q6N021 2002 aaPredicted RBP10.16□□□□□ -0.78
DDX54-206ENST00000549271 DHRS12A0PJE2 317 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 SOX14O95416 240 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 CST1P01037 141 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 PSKH1P11801 424 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 CD80P33681 288 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 ERFP50548 548 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 MMP16P51512 607 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 LOXL3P58215 753 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 SEC61A1P61619 476 aaKnown RBP10.16□□□□□ -0.78
DDX54-206ENST00000549271 GK3PQ14409 553 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 FAM189A2Q15884 450 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 C2orf68Q2NKX9 166 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 SLC36A3Q495N2 470 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 DNAL1Q4LDG9 190 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 ESCO2Q56NI9 601 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 LYPD4Q6UWN0 246 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 COLCA1Q6ZS62 124 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 OR10G2Q8NGC3 310 aa10.16□□□□□ -0.78
DDX54-206ENST00000549271 LINC01006Q8NI28 216 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms