RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 OMGP23515 440 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 RAG2P55895 527 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 MEP1BQ16820 701 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 C11orf91Q3C1V1 193 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 FGD3Q5JSP0 725 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 CLEC12AQ5QGZ9 265 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 FAM201AQ5SY85 155 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 SLC18B1Q6NT16 456 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 CORO6Q6QEF8 472 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 LYPD2Q6UXB3 125 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 BRD3OSQ6XYD6 125 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 C17orf107Q6ZR85 190 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 ZBTB46Q86UZ6 589 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 DEFB107AQ8IZN7 70 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 OR6V1Q8N148 313 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 FAM162AQ96A26 154 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 DHRS1Q96LJ7 313 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 TSSK2Q96PF2 358 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 PITX2Q99697 317 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 ATF6BQ99941 703 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 CDADC1Q9BWV3 514 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 WDR76Q9H967 626 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 CYB5R1Q9UHQ9 305 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 TRBV4-1A0A0J9YWV2 114 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 IGHV3-64DA0A0J9YX35 117 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 ZNF879B4DU55 563 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 C22orf46C9J442 243 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 H0YHG0 523 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 GMDSO60547 372 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 FAM20BO75063 409 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 RENP00797 406 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 CFHR2P36980 270 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 CENPAP49450 140 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 PSME3P61289 254 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 TRAP1Q12931 704 aaKnown RBP10.68□□□□□ -0.7
PTCH1-218ENST00000548945 MIDNQ504T8 468 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 OLFML2AQ68BL7 652 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 CFAP77Q6ZQR2 320 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 PGAP1Q75T13 922 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 OR2AJ1Q8NGZ0 328 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 SSMEM1Q8WWF3 244 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 TAF15Q92804 592 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTCH1-218ENST00000548945 C7orf34Q96L11 122 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 ERMAPQ96PL5 475 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-218ENST00000548945 CITED1Q99966 193 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 KCTD14Q9BQ13 255 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-218ENST00000548945 FUZQ9BT04 418 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 THTPAQ9BU02 230 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 FN3KRPQ9HA64 309 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 C1RLQ9NZP8 487 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 ERVK-18Q9QC07 812 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 RNF7Q9UBF6 113 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 ABCD2Q9UBJ2 740 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 KCNG2Q9UJ96 466 aa10.68□□□□□ -0.7
PTCH1-218ENST00000548945 CLPSL1A2RUU4 121 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 F5H5K5 113 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 LGALS8O00214 317 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 IDH3BO43837 385 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 LCATP04180 440 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 MELTFP08582 738 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 MMP9P14780 707 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 SLC6A6P31641 620 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 GGT2P36268 569 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 TPTEP56180 551 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 SMIM11AP58511 58 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 RELBQ01201 579 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 PDCD1Q15116 288 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 SEC23BQ15437 767 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 OR8G1Q15617 311 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 RFX4Q33E94 735 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 FIP1L1Q6UN15 594 aaKnown RBP10.67□□□□□ -0.7
PTCH1-218ENST00000548945 ZNF620Q6ZNG0 422 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-218ENST00000548945 KIR3DL3Q8N743 410 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 PNLDC1Q8NA58 520 aaKnown RBP10.67□□□□□ -0.7
PTCH1-218ENST00000548945 FANK1Q8TC84 345 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 SPRYD4Q8WW59 207 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-218ENST00000548945 GATAD2BQ8WXI9 593 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 DYRK2Q92630 601 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 UTP4Q969X6 686 aaKnown RBP10.67□□□□□ -0.7
PTCH1-218ENST00000548945 SLCO4A1Q96BD0 722 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 TECTBQ96PL2 329 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 NMNAT3Q96T66 252 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 PCGF1Q9BSM1 259 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 CHIAQ9BZP6 476 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 TRIM15Q9C019 465 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 MARCH7Q9H992 704 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 SRA1Q9HD15 236 aaKnown RBP10.67□□□□□ -0.7
PTCH1-218ENST00000548945 SPAG4Q9NPE6 437 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 PNRC2Q9NPJ4 139 aaKnown RBP10.67□□□□□ -0.7
PTCH1-218ENST00000548945 DCAF13Q9NV06 445 aaKnown RBP10.67□□□□□ -0.7
PTCH1-218ENST00000548945 TMCC3Q9ULS5 477 aa10.67□□□□□ -0.7
PTCH1-218ENST00000548945 SAMD4AQ9UPU9 718 aaKnown RBP10.67□□□□□ -0.7
PTCH1-218ENST00000548945 TRAV38-1A0A0B4J264 116 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 CENPVL3A0A0U1RRI6 287 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 CD300LBA8K4G0 201 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 M0QZ24 198 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 M0R135 149 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 TIMM23O14925 209 aa10.66□□□□□ -0.7
PTCH1-218ENST00000548945 TOX4O94842 621 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms