RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 LOC100653049A0A140TA62 436 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 GOLGA8OA6NCC3 632 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 SMCO2A6NFE2 343 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 OR5H1A6NKK0 313 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 NDUFC2-KCTD14E9PQ53 114 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 GOLGA8NF8WBI6 632 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 SMKR1H3BMG3 65 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 NDUFS8O00217 210 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 EIF4E2O60573 245 aaKnown RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 EIF1BO60739 113 aaKnown RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 KRT34O76011 436 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 CYB5R3P00387 301 aaPredicted RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 IGHV3-11P01762 117 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 STAG3L3P0CL85 134 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 BMI1P35226 326 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 NUP62P37198 522 aaPredicted RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 EIF1P41567 113 aaKnown RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 PRLHRP49683 370 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 ATP5IP56385 69 aaPredicted RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 STXBP1P61764 594 aaKnown RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 RPS23P62266 143 aaKnown RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 RPS11P62280 158 aaKnown RBP eCLIP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 TEX30Q5JUR7 227 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 PRAMEF20Q5VT98 475 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 TMCO2Q7Z6W1 182 aaPredicted RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 SPATA24Q86W54 205 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 ZNF101Q8IZC7 436 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 SLC35G3Q8N808 338 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 KCNG3Q8TAE7 436 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 KLF14Q8TD94 323 aaPredicted RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 C19orf60Q96EN9 201 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 WDR34Q96EX3 536 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 MTG1Q9BT17 334 aaPredicted RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 FAM192AQ9GZU8 254 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 ZSCAN16Q9H4T2 348 aaPredicted RBP1.74□□□□□ -2.13
CNOT2-215ENST00000548863 METTL7AQ9H8H3 244 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 SIGLEC7Q9Y286 467 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 COMMD3-BMI1R4GMX3 469 aa1.74□□□□□ -2.13
CNOT2-215ENST00000548863 TSPOAP1O95153 1857 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 ZNF407Q9C0G0 2248 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 A0A075B6Q4 140 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 DNALI1O14645 258 aaPredicted RBP1.73□□□□□ -2.13
CNOT2-215ENST00000548863 GLSO94925 669 aaPredicted RBP1.73□□□□□ -2.13
CNOT2-215ENST00000548863 ARG1P05089 322 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 TPM3P06753 285 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 UQCRFS1P1P0C7P4 283 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 RALBP11234 206 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 ZNF24P17028 368 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 PSMB5P28074 263 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 RBM34P42696 430 aaKnown RBP1.73□□□□□ -2.13
CNOT2-215ENST00000548863 EIF3EP60228 445 aaKnown RBP1.73□□□□□ -2.13
CNOT2-215ENST00000548863 DNAJC3Q13217 504 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 RBMY1FQ15415 496 aaKnown RBP1.73□□□□□ -2.13
CNOT2-215ENST00000548863 SSX2Q16385 188 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 YIF1BQ5BJH7 314 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 SOHLH1Q5JUK2 328 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 H3F3CQ6NXT2 135 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 NPSR1Q6W5P4 371 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 NANOGNBQ7Z5D8 188 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 MRPL55Q7Z7F7 128 aaKnown RBP1.73□□□□□ -2.13
CNOT2-215ENST00000548863 FAM9CQ8IZT9 166 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 CSGALNACT2Q8N6G5 542 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 LINC00469Q8N7U9 141 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 OR5T1Q8NG75 326 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 OR52E2Q8NGJ4 325 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 ZCCHC13Q8WW36 166 aaKnown RBP1.73□□□□□ -2.13
CNOT2-215ENST00000548863 LRRC39Q96DD0 335 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 SHANK2-AS3Q9BTD1 123 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 SAMD10Q9BYL1 202 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 EXO5Q9H790 373 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 TMEM27Q9HBJ8 222 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 RHBDL2Q9NX52 303 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 NLRC5Q86WI3 1866 aa1.73□□□□□ -2.13
CNOT2-215ENST00000548863 BRD4O60885 1362 aaPredicted RBP1.72□□□□□ -2.13
CNOT2-215ENST00000548863 PLEKHG2Q9H7P9 1386 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 MAP3K19Q56UN5 1328 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 IGHV3-49A0A0A0MS15 119 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 A0A0J9YXV3 536 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 A0A1W2PNN7 141 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 ZNF879B4DU55 563 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 WRBO00258 174 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 DNAJB6O75190 326 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 CTAG2O75638 210 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 OTCP00480 354 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 AGTP01019 485 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 KRT14P02533 472 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 S100A6P06703 90 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 ZNF3P17036 446 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 PRKACBP22694 351 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 MAGEA1P43355 309 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 SP4Q02446 784 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 PRKCDQ05655 676 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 ARMC12Q5T9G4 340 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 SLC8B1Q6J4K2 584 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 COMTD1Q86VU5 262 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 FAM228AQ86W67 206 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 IQCKQ8N0W5 287 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 TRIML2Q8N7C3 387 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 ZNF680Q8NEM1 530 aa1.72□□□□□ -2.13
CNOT2-215ENST00000548863 RASD2Q96D21 266 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms