RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ARSBP15848 533 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 RAB6AP20340 208 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 MAGEB1P43366 347 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 TMPRSS3P57727 454 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 PMP22Q01453 160 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 RIPPLY1Q0D2K3 151 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 FAPQ12884 760 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 MRPL49Q13405 166 aaKnown RBP11.77□□□□□ -0.53
PTCH1-215ENST00000547672 KRTAP27-1Q3LI81 207 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 C1QTNF12Q5T7M4 302 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 RAB12Q6IQ22 244 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 FAM180AQ6UWF9 173 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 UTS2BQ765I0 119 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 PRSS45Q7RTY3 260 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 CMTM4Q8IZR5 234 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 JAGN1Q8N5M9 183 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 PNLDC1Q8NA58 520 aaKnown RBP11.77□□□□□ -0.53
PTCH1-215ENST00000547672 OR1J2Q8NGS2 313 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 SYNPRQ8TBG9 265 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 DEDD2Q8WXF8 326 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 HAVCR1Q96D42 359 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 TECTBQ96PL2 329 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 GFI1Q99684 422 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 THAP7Q9BT49 309 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-215ENST00000547672 OPA3Q9H6K4 179 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 METTL17Q9H7H0 456 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-215ENST00000547672 MOV10Q9HCE1 1003 aaKnown RBP11.77□□□□□ -0.53
PTCH1-215ENST00000547672 C14orf119Q9NWQ9 140 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 RHBDL2Q9NX52 303 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 OR5V1Q9UGF6 321 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 RAB22AQ9UL26 194 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 MYO15AQ9UKN7 3530 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 DMDP11532 3685 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 A0A1W2PQ09 198 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 BPNT1O95861 308 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 TGM6O95932 706 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 IGLV3-1P01715 115 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 MMP7P09237 267 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-215ENST00000547672 AZGP1P25311 298 aaKnown RBP11.76□□□□□ -0.53
PTCH1-215ENST00000547672 MALLQ13021 153 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 BAK1Q16611 211 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 C2orf76Q3KRA6 126 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 PABPC1L2AQ5JQF8 200 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 TMEM69Q5SWH9 247 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 GLYATL3Q5SZD4 288 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 ZBTB37Q5TC79 503 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 NSUN5P2Q63ZY6 315 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 FAM166AQ6J272 317 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 ZNF774Q6NX45 483 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 ZNF529Q6P280 563 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 LINGO2Q7L985 606 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 NUFIP2Q7Z417 695 aaKnown RBP11.76□□□□□ -0.53
PTCH1-215ENST00000547672 SEMA6DQ8NFY4 1073 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 OR5L1Q8NGL2 311 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 OR5H6Q8NGV6 325 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 OR6K3Q8NGY3 331 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 OR14K1Q8NGZ2 314 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 FCAMRQ8WWV6 532 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 FAM71F1Q96KD3 344 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-215ENST00000547672 WNT5BQ9H1J7 359 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 CLEC4AQ9UMR7 237 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 WASF3Q9UPY6 502 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 V9GYS6 101 aa11.76□□□□□ -0.53
PTCH1-215ENST00000547672 A0A0G2JMP0 313 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 A0A0X1KG70 313 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 FIGNL2A6NMB9 653 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 J3QW42 95 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 XRCC3O43542 346 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 PRKACBP22694 351 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 GSK3AP49840 483 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 SPOCK1Q08629 439 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 TAB1Q15750 504 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 C3AR1Q16581 482 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 RSPO1Q2MKA7 263 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-215ENST00000547672 ZNF57Q68EA5 555 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-215ENST00000547672 UNQ6126/PRO20091Q6UXV3 157 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 C1orf162Q8NEQ5 155 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-215ENST00000547672 OR4M2Q8NGB6 313 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 ORAI1Q96D31 301 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 BOD1Q96IK1 185 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 GPR137Q96N19 417 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 PCDHB16Q9NRJ7 776 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 TAS2R8Q9NYW2 309 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 FBLN5Q9UBX5 448 aa11.75□□□□□ -0.53
PTCH1-215ENST00000547672 MRPS7Q9Y2R9 242 aaKnown RBP11.75□□□□□ -0.53
PTCH1-215ENST00000547672 A0A087WV48 116 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 A0A1B0GVG6 124 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 GABARAPH6UMI1 98 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 IGHV3-9P01782 118 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 SLC2A1P11166 492 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 CD79AP11912 226 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 APLNRP35414 380 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 ZNF93P35789 620 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-215ENST00000547672 POU3F4P49335 361 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 PER3P56645 1201 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 UBE2NP61088 152 aaKnown RBP11.74□□□□□ -0.53
PTCH1-215ENST00000547672 RAB1AP62820 205 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 SSBP1Q04837 148 aaKnown RBP11.74□□□□□ -0.53
PTCH1-215ENST00000547672 P2RY14Q15391 338 aa11.74□□□□□ -0.53
PTCH1-215ENST00000547672 Q6ZT83 130 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms