RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 SCGB2B2Q4G0G5 96 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 Q7L0L9 218 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 OR13C8Q8NGS7 320 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 SLC2A8Q9NY64 477 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 GLTPQ9NZD2 209 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 DISC1C4P0D8 188 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 ARPC5O15511 151 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 NR2C1P13056 603 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 LIFP15018 202 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 CCL1P22362 96 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 GSK3AP49840 483 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 DSCR4P56555 118 aaPredicted RBP13.72□□□□□ -0.21
BRF1-212ENST00000547562 RAB14P61106 215 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 GRB2P62993 217 aaKnown RBP13.72□□□□□ -0.21
BRF1-212ENST00000547562 SMUG1Q53HV7 270 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 B3GNTL1Q67FW5 361 aaPredicted RBP13.72□□□□□ -0.21
BRF1-212ENST00000547562 PGAP1Q75T13 922 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 OR5AS1Q8N127 324 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 OR2Y1Q8NGV0 311 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 PAQR8Q8TEZ7 354 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 PCNPQ8WW12 178 aaKnown RBP13.72□□□□□ -0.21
BRF1-212ENST00000547562 NUDT16L1Q9BRJ7 211 aaKnown RBP13.72□□□□□ -0.21
BRF1-212ENST00000547562 GSX2Q9BZM3 304 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 PRDM6Q9NQX0 595 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 OR14I1A6ND48 311 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 CSN2P05814 226 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 ZNF17P17021 662 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 NKPD1Q17RQ9 610 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 RNASE10Q5GAN6 216 aaKnown RBP13.71□□□□□ -0.21
BRF1-212ENST00000547562 RAET1LQ5VY80 246 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 C3P1Q6ZMU1 363 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 RNF144BQ7Z419 303 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 C12orf45Q8N5I9 185 aaPredicted RBP13.71□□□□□ -0.21
BRF1-212ENST00000547562 GVQW1Q8N7I0 195 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 ZNF283Q8N7M2 679 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 NUDCD2Q8WVJ2 157 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 NTNG2Q96CW9 530 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 FAM71F1Q96KD3 344 aaPredicted RBP13.71□□□□□ -0.21
BRF1-212ENST00000547562 SPACA5Q96QH8 159 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 PRRT1Q99946 306 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 ZNF416Q9BWM5 594 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 SH2D2AQ9NP31 389 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 CNTRLQ7Z7A1 2325 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 DMDP11532 3685 aa13.71□□□□□ -0.21
BRF1-212ENST00000547562 CER1O95813 267 aa13.71□□□□□ -0.22
BRF1-212ENST00000547562 S100A11P31949 105 aa13.71□□□□□ -0.22
BRF1-212ENST00000547562 CSNK1A1P48729 337 aa13.71□□□□□ -0.22
BRF1-212ENST00000547562 LSM6P62312 80 aaKnown RBP13.71□□□□□ -0.22
BRF1-212ENST00000547562 TOR2AQ5JU69 321 aa13.71□□□□□ -0.22
BRF1-212ENST00000547562 FAM57BQ71RH2 274 aa13.71□□□□□ -0.22
BRF1-212ENST00000547562 CD163Q86VB7 1156 aa13.71□□□□□ -0.22
BRF1-212ENST00000547562 ZNF101Q8IZC7 436 aa13.71□□□□□ -0.22
BRF1-212ENST00000547562 OR10R2Q8NGX6 335 aa13.71□□□□□ -0.22
BRF1-212ENST00000547562 MARVELD3Q96A59 401 aa13.71□□□□□ -0.22
BRF1-212ENST00000547562 RTTNQ86VV8 2226 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 FXYD6-FXYD2A0A087WZ82 144 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 ZIC3O60481 467 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 EIF1BO60739 113 aaKnown RBP13.7□□□□□ -0.22
BRF1-212ENST00000547562 GNB3P16520 340 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 MPZP25189 248 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
BRF1-212ENST00000547562 SGCAQ16586 387 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 DOK3Q7L591 496 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 TMEM156Q8N614 296 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 SELENOIQ9C0D9 397 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 FXYD6Q9H0Q3 95 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 MRPS28Q9Y2Q9 187 aaKnown RBP13.7□□□□□ -0.22
BRF1-212ENST00000547562 TUBAL3A6NHL2 446 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 G3V3Y1 287 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 MSR1P21757 451 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 CTSSP25774 331 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 GUCA1AP43080 201 aaPredicted RBP13.7□□□□□ -0.22
BRF1-212ENST00000547562 GMFBP60983 142 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 CXADRP78310 365 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 DHRS2Q13268 280 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 HLXQ14774 488 aaPredicted RBP13.7□□□□□ -0.22
BRF1-212ENST00000547562 ZMYND11Q15326 602 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 SLC22A6Q4U2R8 563 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 NHLRC3Q5JS37 347 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 LY6G6FQ5SQ64 297 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 PHYHD1Q5SRE7 291 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 C10orf128Q5T292 105 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 OR52W1Q6IF63 320 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 GLIPR1L1Q6UWM5 242 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 OR2W3Q7Z3T1 314 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 COMMD7Q86VX2 200 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 RPS19BP1Q86WX3 136 aaKnown RBP13.7□□□□□ -0.22
BRF1-212ENST00000547562 TMEM54Q969K7 222 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 C1orf147Q96MC9 270 aaPredicted RBP13.7□□□□□ -0.22
BRF1-212ENST00000547562 JSRP1Q96MG2 331 aaPredicted RBP13.7□□□□□ -0.22
BRF1-212ENST00000547562 NICN1Q9BSH3 213 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 ZNF160Q9HCG1 818 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 DKKL1Q9UK85 242 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 COLQQ9Y215 455 aaPredicted RBP13.7□□□□□ -0.22
BRF1-212ENST00000547562 VSIG4Q9Y279 399 aa13.7□□□□□ -0.22
BRF1-212ENST00000547562 NSG1A0A0A6YYJ2 146 aa13.69□□□□□ -0.22
BRF1-212ENST00000547562 IGHV3-15A0A0B4J1V0 119 aa13.69□□□□□ -0.22
BRF1-212ENST00000547562 LAMTOR5O43504 91 aa13.69□□□□□ -0.22
BRF1-212ENST00000547562 VAMP5O95183 116 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms