RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 NAA40Q86UY6 237 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 COMMD2Q86X83 199 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 SSC4DQ8WTU2 575 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 PHYHIPQ92561 330 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 BCL7BQ9BQE9 202 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 TMED9Q9BVK6 235 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 FUNDC2Q9BWH2 189 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 NPAP1Q9NZP6 1156 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 SSR3Q9UNL2 185 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 SF3B6Q9Y3B4 125 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 LOC107986453A0A1B0GWG9 222 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 LOC390937A0A1W2PQ73 354 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 SYT7O43581 403 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 GATBO75879 557 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 RGS9O75916 674 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 ATE1O95260 518 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 CD2P06729 351 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 PLA2G2AP14555 144 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 GRNP28799 593 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 TMBIM6P55061 237 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 UCP2P55851 309 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 RPS23P62266 143 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 Q499Y3 187 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 GPR107Q5VW38 600 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 CD200R1LQ6Q8B3 271 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 C22orf34Q6ZV56 151 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 MYPOPQ86VE0 399 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 ANKRD13BQ86YJ7 626 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 ZNF420Q8TAQ5 688 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 ABHD4Q8TB40 342 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 OR51E1Q8TCB6 317 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 RADILQ96JH8 1075 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 NPDC1Q9NQX5 325 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 GSTK1Q9Y2Q3 226 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 RTTNQ86VV8 2226 aa13.69□□□□□ -0.22
TRAFD1-203ENST00000547063 TRDV1A0A1B0GX56 115 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 DHRS7CA6NNS2 312 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 H3BSA7 217 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 P2RY10O00398 339 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 AIREO43918 545 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 SMPD2O60906 423 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 OCM2P0CE71 109 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 CCL1P22362 96 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 WNT5AP41221 380 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 KIR2DL3P43628 341 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 PPP1CBP62140 327 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 RPS25P62851 125 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 ODF4Q2M2E3 257 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 GFOD2Q3B7J2 385 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 SNAI3Q3KNW1 292 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 BEX5Q5H9J7 111 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 CLVS1Q8IUQ0 354 aaPredicted RBP13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 PAQR4Q8N4S7 273 aaPredicted RBP13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 LINC01560Q8TB33 94 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 FAM222BQ8WU58 562 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 RAB2BQ8WUD1 216 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 TSEN15Q8WW01 171 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 TMEM203Q969S6 136 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 PPP1R14AQ96A00 147 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 SPSB4Q96A44 273 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 REEP6Q96HR9 211 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 HEATR1Q9H583 2144 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 GPR84Q9NQS5 396 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 ZNF319Q9P2F9 582 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 DHDHQ9UQ10 334 aa13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 SPTBN1Q01082 2364 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-203ENST00000547063 TRBV5-5A0A0J9YX44 114 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 ZNF879B4DU55 563 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 DHRS3O75911 302 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 ARL6IP5O75915 188 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 NGFP01138 241 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 IGLV3-1P01715 115 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 RAF1P04049 648 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 NR4A1P22736 598 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 GADD45AP24522 165 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 FGF9P31371 208 aaPredicted RBP13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 ACSM3Q53FZ2 586 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 GLYATL3Q5SZD4 288 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 NCMAPQ5T1S8 102 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 PGAP1Q75T13 922 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 MRPL21Q7Z2W9 205 aaKnown RBP13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 ZNF101Q8IZC7 436 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 PLPP7Q8NBV4 271 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 OR13C3Q8NGS6 347 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 SGK3Q96BR1 496 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 C10orf35Q96D05 121 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 FAM192AQ9GZU8 254 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 EXOSC4Q9NPD3 245 aaKnown RBP13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 ENPP5Q9UJA9 477 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 STARD10Q9Y365 291 aa13.67□□□□□ -0.22
TRAFD1-203ENST00000547063 MYO18BQ8IUG5 2567 aa13.66□□□□□ -0.22
TRAFD1-203ENST00000547063 A0A1B0GTI1 187 aa13.66□□□□□ -0.22
TRAFD1-203ENST00000547063 DPPA5A6NC42 116 aa13.66□□□□□ -0.22
TRAFD1-203ENST00000547063 DPRXA6NFQ7 191 aa13.66□□□□□ -0.22
TRAFD1-203ENST00000547063 CCDC160A6NGH7 325 aa13.66□□□□□ -0.22
TRAFD1-203ENST00000547063 VSTM5A8MXK1 200 aa13.66□□□□□ -0.22
TRAFD1-203ENST00000547063 ZNF701M0R085 212 aaPredicted RBP13.66□□□□□ -0.22
TRAFD1-203ENST00000547063 GABRPO00591 440 aa13.66□□□□□ -0.22
TRAFD1-203ENST00000547063 SC5DO75845 299 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms