RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, human

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPAS3-204	ENST00000546849	SMIM31	A0A1B0GVY4	71 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	HEATR9	A2RTY3	570 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	TMEM150B	A6NC51	233 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	SYCE1L	A8MT33	242 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	BBIP1	A8MTZ0	92 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	C12orf77	C9JDV5	145 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	PSG2	P11465	335 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	CRISP2	P16562	243 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	TCN1	P20061	433 aa	Predicted RBP	4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	TNFSF9	P41273	254 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	AQP5	P55064	265 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	ESRRG	P62508	458 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	RPL23A	P62750	156 aa	Known RBP	4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	CAPRIN1	Q14444	709 aa	Known RBP	4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	KIAA0087	Q14695	138 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	PSMD5	Q16401	504 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	RFX4	Q33E94	735 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	MAJIN	Q3KP22	176 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	HSDL1	Q3SXM5	330 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	CST9	Q5W186	159 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	STEAP4	Q687X5	459 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	ZNF429	Q86V71	674 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	ATPAF2	Q8N5M1	289 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	OR51G1	Q8NGK1	321 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	OR10G9	Q8NGN4	311 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	OR8J1	Q8NGP2	316 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	OR13C2	Q8NGS9	318 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	UBA3	Q8TBC4	463 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	OPTN	Q96CV9	577 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	CERS2	Q96G23	380 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	PLEKHA8	Q96JA3	519 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	CNDP1	Q96KN2	507 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	SERPINB11	Q96P15	392 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	CSPG4P5	Q96PW8	444 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	CHRDL1	Q9BU40	450 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	SNRNP25	Q9BV90	132 aa	Known RBP	4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	ACP6	Q9NPH0	428 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	EXD2	Q9NVH0	621 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	GID8	Q9NWU2	228 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	IKZF2	Q9UKS7	526 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	ACOT9	Q9Y305	439 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	PEX16	Q9Y5Y5	336 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	SI	P14410	1827 aa		4.07	□□□□□ -1.76
NPAS3-204	ENST00000546849	WDFY4	Q6ZS81	3184 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	CIT	O14578	2027 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	PTPRJ	Q12913	1337 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	NKX2-6	A6NCS4	301 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	OR52A4P	A6NMU1	304 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849		H0YJX3	145 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	PANO1	I0J062	215 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	PIR	O00625	290 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	PSMG1	O95456	288 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	RPS2	P15880	293 aa	Known RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	BGN	P21810	368 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	RPL14	P50914	215 aa	Known RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	GPX6	P59796	221 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	ACTR3	P61158	418 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	KCNJ2	P63252	427 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	PPID	Q08752	370 aa	Known RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	BST1	Q10588	318 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	DDX39B	Q13838	428 aa	Known RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	RCN1	Q15293	331 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	MFSD14C	Q5VZR4	134 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	AP1AR	Q63HQ0	302 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	NANOGNB	Q7Z5D8	188 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	ARPIN	Q7Z6K5	226 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	CAMK2N1	Q7Z7J9	78 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	ENTHD1	Q8IYW4	607 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	JOSD2	Q8TAC2	188 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	DTX3L	Q8TDB6	740 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	MCOLN3	Q8TDD5	553 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	C2orf15	Q8WU43	125 aa	Known RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	SMARCD2	Q92925	531 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	NRBF2	Q96F24	287 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	CNN2	Q99439	309 aa	Known RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	NPY6R	Q99463	290 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	RBBP8	Q99708	897 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	MRPL57	Q9BQC6	102 aa	Known RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	ACBD6	Q9BR61	282 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	THTPA	Q9BU02	230 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	TRIM4	Q9C037	500 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	NIPAL2	Q9H841	368 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	DMAP1	Q9NPF5	467 aa	Predicted RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	ADAP2	Q9NPF8	381 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	CCL28	Q9NRJ3	127 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	CALY	Q9NYX4	217 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	ZNF223	Q9UK11	482 aa	Predicted RBP	4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	GINS2	Q9Y248	185 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	HEBP2	Q9Y5Z4	205 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	FAM208B	Q5VWN6	2430 aa		4.06	□□□□□ -1.76
NPAS3-204	ENST00000546849	CCL15-CCL14	A0A0B4J2E2	113 aa		4.05	□□□□□ -1.76
NPAS3-204	ENST00000546849	GOLGA8T	H3BQL2	631 aa		4.05	□□□□□ -1.76
NPAS3-204	ENST00000546849	GOLGA8R	I6L899	631 aa		4.05	□□□□□ -1.76
NPAS3-204	ENST00000546849	CASQ2	O14958	399 aa	Predicted RBP	4.05	□□□□□ -1.76
NPAS3-204	ENST00000546849	KLHL41	O60662	606 aa		4.05	□□□□□ -1.76
NPAS3-204	ENST00000546849	PLIN3	O60664	434 aa		4.05	□□□□□ -1.76

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