RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 PRAMEF20Q5VT98 475 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 LRRC66Q68CR7 880 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 MBOAT2Q6ZWT7 520 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 ZFP41Q8N8Y5 198 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 OR4C5Q8NGB2 326 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 OR1J4Q8NGS1 313 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 OR5B3Q8NH48 314 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 N4BP2L2Q92802 583 aaPredicted RBP1.47□□□□□ -2.17
CCDC38-204ENST00000546816 SLC38A4Q969I6 547 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 WDR34Q96EX3 536 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 BTN2A3PQ96KV6 586 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 TGS1Q96RS0 853 aaKnown RBP1.47□□□□□ -2.17
CCDC38-204ENST00000546816 PLIN2Q99541 437 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 ANKRA2Q9H9E1 313 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 TMEM165Q9HC07 324 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 CSNK1G1Q9HCP0 422 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 NMRK1Q9NWW6 199 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 MTFP1Q9UDX5 166 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 IGKV1-8A0A0C4DH67 115 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 GABRR3A8MPY1 467 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 NVLO15381 856 aaKnown RBP1.46□□□□□ -2.18
CCDC38-204ENST00000546816 CLDN11O75508 207 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 OR2F2O95006 317 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 KRT14P02533 472 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 FTH1P02794 183 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 PCK1P35558 622 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 TALDO1P37837 337 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 SEMG2Q02383 582 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 SELENBP1Q13228 472 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 PPM1LQ5SGD2 360 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 C22orf42Q6IC83 251 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 REEP3Q6NUK4 255 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 TTC23LQ6PF05 361 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 METAP1DQ6UB28 335 aaPredicted RBP1.46□□□□□ -2.18
CCDC38-204ENST00000546816 MBOAT1Q6ZNC8 495 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 TMEM136Q6ZRR5 245 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 SLC16A14Q7RTX9 510 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 MRPL55Q7Z7F7 128 aaKnown RBP1.46□□□□□ -2.18
CCDC38-204ENST00000546816 CMC1Q7Z7K0 106 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 OR4A4PQ8NGN8 299 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 PHOSPHO2Q8TCD6 241 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 APH1BQ8WW43 257 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 EEF1AKMT3Q96AZ1 226 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 MYOZ1Q9NP98 299 aaPredicted RBP1.46□□□□□ -2.18
CCDC38-204ENST00000546816 TAS2R1Q9NYW7 299 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 MTCH1Q9NZJ7 389 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 RRP15Q9Y3B9 282 aaKnown RBP1.46□□□□□ -2.18
CCDC38-204ENST00000546816 BAZ2AQ9UIF9 1905 aaKnown RBP1.46□□□□□ -2.18
CCDC38-204ENST00000546816 TENM1Q9UKZ4 2725 aa1.46□□□□□ -2.18
CCDC38-204ENST00000546816 SMCO3A2RU48 225 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 K7EMT4 169 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 MFNGO00587 321 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 EIF3HO15372 352 aaKnown RBP eCLIP1.45□□□□□ -2.18
CCDC38-204ENST00000546816 OR7C2O60412 319 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 WBP4O75554 376 aaKnown RBP1.45□□□□□ -2.18
CCDC38-204ENST00000546816 GATBO75879 557 aaKnown RBP1.45□□□□□ -2.18
CCDC38-204ENST00000546816 AGTP01019 485 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 IGLV7-43P04211 117 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 CD37P11049 281 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 NTF3P20783 257 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 GALR1P47211 349 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 KDSRQ06136 332 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 ART3Q13508 389 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 PSMD5Q16401 504 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 ALKBH6Q3KRA9 238 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 HSDL1Q3SXM5 330 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 CARD17Q5XLA6 110 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 MED27Q6P2C8 311 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 SMARCD3Q6STE5 483 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 SCD5Q86SK9 330 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 CMTM1Q8IZ96 169 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 C19orf18Q8NEA5 215 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 SLC26A10Q8NG04 563 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 OR1L1Q8NH94 360 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 CAPSLQ8WWF8 208 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 SHANK2-AS3Q9BTD1 123 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 PITPNC1Q9UKF7 332 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 SLC17A4Q9Y2C5 497 aa1.45□□□□□ -2.18
CCDC38-204ENST00000546816 SMCO2A6NFE2 343 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 PCNX2A6NKB5 2137 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 TRIM64CA6NLI5 447 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 NCBP2LA6PVI3 153 aaKnown RBP1.44□□□□□ -2.18
CCDC38-204ENST00000546816 ZNF878C9JN71 531 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 ERLIN1O75477 346 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 DEDDO75618 318 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 HPRT1P00492 218 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 MT-ND4P03905 459 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 IL32P24001 234 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 SYKP43405 635 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 CRISP1P54107 249 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 ZNF121P58317 390 aaPredicted RBP1.44□□□□□ -2.18
CCDC38-204ENST00000546816 BEX3Q00994 111 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 PRKCDQ05655 676 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 MEF2CQ06413 473 aaPredicted RBP1.44□□□□□ -2.18
CCDC38-204ENST00000546816 BIKQ13323 160 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 FAM53BQ14153 422 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 IHHQ14623 411 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 SP6Q3SY56 376 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 HSP90AB3PQ58FF7 597 aa1.44□□□□□ -2.18
CCDC38-204ENST00000546816 LINC00336Q6ZUF6 198 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms