RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SELENOIQ9C0D9 397 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 C1orf123Q9NWV4 160 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 MED29Q9NX70 200 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 PIGLQ9Y2B2 252 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 PCDHGA9Q9Y5G4 932 aaKnown RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 A0A0B4J2A0 478 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 EPOPA6NHQ4 379 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 PYCARD-AS1I3L0S3 204 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 GNB3P16520 340 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 ENPP1P22413 925 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 NFYBP25208 207 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 ECI1P42126 302 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 ZNF133P52736 654 aaPredicted RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 ATP1B3P54709 279 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 FXYD4P59646 89 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 MOB3CQ70IA8 216 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 PGLYRP3Q96LB9 341 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 OCSTAMPQ9BR26 566 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 CDCP1Q9H5V8 836 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 SHPKQ9UHJ6 478 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 B3GALT5Q9Y2C3 310 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 IGHV1OR21-1A0A087WYE8 117 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 ZNF587BE7ETH6 402 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 DVL2O14641 736 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 SEMA7AO75326 666 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 CHRM2P08172 466 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 QDPRP09417 244 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 RPP30P78346 268 aaKnown RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 MGAT2Q10469 447 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 RAB31Q13636 194 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 SNTB1Q13884 538 aaKnown RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 ZNF626Q68DY1 528 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 ANKRD16Q6P6B7 361 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 C9orf62Q8N4C0 152 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 AGBL5Q8NDL9 886 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 OR11H7Q8NGC8 314 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 VPS25Q9BRG1 176 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 FOXQ1Q9C009 403 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 B3GALT1Q9Y5Z6 326 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 COL4A6Q14031 1691 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 A0A1B0GTH9 108 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 MYF5P13349 255 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 TAGLN2P37802 199 aaKnown RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 RAB13P51153 203 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 C19orf57Q0VDD7 668 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 TOMM34Q15785 309 aaPredicted RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 ADAM5Q6NVV9 412 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 LANCL3Q6ZV70 420 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 NAXDQ8IW45 347 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 GJC3Q8NFK1 279 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 OR4D9Q8NGE8 314 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 OR4D10Q8NGI6 311 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 GPR119Q8TDV5 335 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 ZNF721Q8TF20 911 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 C2CD4CQ8TF44 421 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 SEC22AQ96IW7 307 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 ZNF768Q9H5H4 540 aaKnown RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 PLEKHA3Q9HB20 300 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 GDF2Q9UK05 429 aaPredicted RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 FITM1A5D6W6 292 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 CCSO14618 274 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 OR2J2O76002 312 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 AQP8O94778 261 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 NGFRP08138 427 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 ICAM2P13598 275 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 MGMTP16455 207 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 HTR5AP47898 357 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 MEOX2P50222 304 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 UBE2MP61081 183 aaKnown RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 MRPL49Q13405 166 aaKnown RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 ZNF266Q14584 549 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 EBPQ15125 230 aaKnown RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 ACOT7LQ6ZUV0 252 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 MDGA2Q7Z553 956 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 OR2AK2Q8NG84 335 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 TOMM40LQ969M1 308 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 SLAMF9Q96A28 289 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 TXN2Q99757 166 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 TOLLIPQ9H0E2 274 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 TMPRSS5Q9H3S3 457 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 GAR1Q9NY12 217 aaKnown RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 CLEC1BQ9P126 229 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 TMEM184BQ9Y519 407 aaPredicted RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 FBXO24O75426 580 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SCAF4O95104 1147 aaKnown RBP5.19□□□□□ -1.58
VPS50-220ENST00000544910 OR2C1O95371 312 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 PNPP00491 289 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 MT-ND4LP03901 98 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 ALOX5APP20292 161 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 PTAFRP25105 342 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SELENOPP49908 381 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 CCL7P80098 99 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 H3F3AP84243 136 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 DCAF12Q5T6F0 453 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 KANSL1Q7Z3B3 1105 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 LYG2Q86SG7 212 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 SFTPA2Q8IWL1 248 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 ZNF687Q8N1G0 1237 aa5.19□□□□□ -1.58
VPS50-220ENST00000544910 KCNRGQ8N5I3 272 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms