RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 OAFQ86UD1 273 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 IGFN1Q86VF2 1251 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 C19orf18Q8NEA5 215 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 OR52J3Q8NH60 311 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 OR51A7Q8NH64 312 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 RASD2Q96D21 266 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 FAM46AQ96IP4 442 aaKnown RBP10.6□□□□□ -0.71
USP28-212ENST00000544750 WDFY2Q96P53 400 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 TRIM15Q9C019 465 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 MUC13Q9H3R2 512 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 PTTG3PQ9NZH4 202 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 FAM32AQ9Y421 112 aaKnown RBP10.6□□□□□ -0.71
USP28-212ENST00000544750 DNAH9Q9NYC9 4486 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 LRRC30A6NM36 301 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 H7C1C5 153 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 ACOT8O14734 319 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 PIN1P1O15428 100 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 PTP4A3O75365 173 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 OPN1MWP04001 364 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 FABP3P05413 133 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 DBHP09172 617 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 CSF1P09603 554 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 OPN1MW2P0DN77 364 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 OPN1MW3P0DN78 364 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 RRM2P31350 389 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 LCN6P62502 163 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 HOXA4Q00056 320 aaPredicted RBP10.59□□□□□ -0.71
USP28-212ENST00000544750 SPIBQ01892 262 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 COX10Q12887 443 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 AQP6Q13520 282 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 ANKDD1AQ495B1 522 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 CD276Q5ZPR3 534 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 C1orf94Q6P1W5 598 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 FAM122BQ7Z309 247 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 ZDHHC21Q8IVQ6 265 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 PIP4P2Q8N4L2 257 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 CELF2-AS1Q8N7Q2 184 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 OR1F12Q8NHA8 337 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 ASB9Q96DX5 294 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 ZNF582Q96NG8 517 aaPredicted RBP10.59□□□□□ -0.71
USP28-212ENST00000544750 SMURF1Q9HCE7 757 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 ATPIF1Q9UII2 106 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 TMCC3Q9ULS5 477 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 SIGLEC7Q9Y286 467 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 TMEM5Q9Y2B1 443 aa10.59□□□□□ -0.71
USP28-212ENST00000544750 A6NIZ1 184 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 FAM20BO75063 409 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 GADD45GO95257 159 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 HLA-DPB1P04440 258 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 CD200P41217 278 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 RGS6P49758 472 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 RAP1BP61224 184 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 RAP1AP62834 184 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 ZBED5Q49AG3 693 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 PGM2L1Q6PCE3 622 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 REC114Q7Z4M0 266 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 DHFR2Q86XF0 187 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 LHX4Q969G2 390 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 ERGIC1Q969X5 290 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 CCDC124Q96CT7 223 aaKnown RBP10.58□□□□□ -0.72
USP28-212ENST00000544750 THTPAQ9BU02 230 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 VNN3Q9NY84 501 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 KIF17Q9P2E2 1029 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 ADAM18Q9Y3Q7 739 aa10.58□□□□□ -0.72
USP28-212ENST00000544750 TEX13CA0A0J9YWL9 993 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 CTLA4P16410 223 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 FPR3P25089 353 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 LSM6P62312 80 aaKnown RBP10.57□□□□□ -0.72
USP28-212ENST00000544750 HIST1H3AP68431 136 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 BNIP1Q12981 228 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 MPPED2Q15777 294 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 RSPO1Q2MKA7 263 aaPredicted RBP10.57□□□□□ -0.72
USP28-212ENST00000544750 MESTQ5EB52 335 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 HIST2H3PS2Q5TEC6 136 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 METTL11BQ5VVY1 283 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 OTPQ5XKR4 325 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 COLCA1Q6ZS62 124 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 HIST2H3AQ71DI3 136 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 RRM2BQ7LG56 351 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 PNLDC1Q8NA58 520 aaKnown RBP10.57□□□□□ -0.72
USP28-212ENST00000544750 BHLHE23Q8NDY6 225 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 OR5L1Q8NGL2 311 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 OR4C15Q8NGM1 316 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 LRTOMTQ8WZ04 291 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 APOBEC3DQ96AK3 386 aaPredicted RBP10.57□□□□□ -0.72
USP28-212ENST00000544750 MCUR1Q96AQ8 359 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 RSRC1Q96IZ7 334 aaKnown RBP10.57□□□□□ -0.72
USP28-212ENST00000544750 TECTBQ96PL2 329 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 GPX7Q96SL4 187 aaPredicted RBP10.57□□□□□ -0.72
USP28-212ENST00000544750 DPAGT1Q9H3H5 408 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 MAGIXQ9H6Y5 334 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 TMEM100Q9NV29 134 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 ZNRD1Q9P1U0 126 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 ERVK-18Q9QC07 812 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 LYVE1Q9Y5Y7 322 aa10.57□□□□□ -0.72
USP28-212ENST00000544750 ZNF816-ZNF321PA0A0X1KG74 233 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 RER1O15258 196 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 GPR37O15354 613 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 AHCYL1O43865 530 aa10.56□□□□□ -0.72
USP28-212ENST00000544750 PTBP3O95758 552 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms